Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

Click here to switch to the map view.

The map label for this gene is merP [H]

Identifier: 117676252

GI number: 117676252

Start: 202785

End: 203060

Strand: Reverse

Name: merP [H]

Synonym: Shewana3_4313

Alternate gene names: 117676252

Gene position: 203060-202785 (Counterclockwise)

Preceding gene: 117676253

Following gene: 117676251

Centisome position: 72.8

GC content: 44.93

Gene sequence:

>276_bases
ATGAAGAAAATTGCCTTGTTGTCTTTGCTAGCCTTGACCAGCCTGACCGCTTTTGCTGCGCCGAAAACAGTTACTTTGGA
AGTTCCAACCATGAACTGTGTGACCTGCCCCTTTACGGTCAAAAATGCCTTAAAAAATGTTGAGGGTGTGAGTAAAGCTG
AAGTCACCTTTGAAACCAAATTGGCAGTTGTCACATTCGACGACGAAAAAACCACAGTAAAAGCACTGACCGAAGCCACC
ACTAATGCGGGTTATCCATCAACGCTCAAGGAGTAA

Upstream 100 bases:

>100_bases
TTGGTGCTAGTCACCAGCAATTATTGGATTGTCTGGTTTGCCTGAATACTTTCTTACCGCTCACTTTTATTAATGACTTA
ATACGTTACTGGAGAAAATG

Downstream 100 bases:

>100_bases
AGCATGGAAATGCTAATACAGTTACTGACCCGTTTCGGCGATAAGATTAGCTCATTGGGCGCGCTGGTTTCTGCTATGGG
ATGCGCCATGTGTTTCCCGG

Product: mercuric transport protein periplasmic component

Products: NA

Alternate protein names: Mercury scavenger protein; Periplasmic mercury ion-binding protein [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKKIALLSLLALTSLTAFAAPKTVTLEVPTMNCVTCPFTVKNALKNVEGVSKAEVTFETKLAVVTFDDEKTTVKALTEAT
TNAGYPSTLKE

Sequences:

>Translated_91_residues
MKKIALLSLLALTSLTAFAAPKTVTLEVPTMNCVTCPFTVKNALKNVEGVSKAEVTFETKLAVVTFDDEKTTVKALTEAT
TNAGYPSTLKE
>Mature_91_residues
MKKIALLSLLALTSLTAFAAPKTVTLEVPTMNCVTCPFTVKNALKNVEGVSKAEVTFETKLAVVTFDDEKTTVKALTEAT
TNAGYPSTLKE

Specific function: Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (merA) via the merT protein [H]

COG id: COG2608

COG function: function code P; Copper chaperone

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HMA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR017969
- InterPro:   IPR006121
- InterPro:   IPR011795 [H]

Pfam domain/function: PF00403 HMA [H]

EC number: NA

Molecular weight: Translated: 9710; Mature: 9710

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIALLSLLALTSLTAFAAPKTVTLEVPTMNCVTCPFTVKNALKNVEGVSKAEVTFETK
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHCCCCCCCEEEEEEE
LAVVTFDDEKTTVKALTEATTNAGYPSTLKE
EEEEEECCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKIALLSLLALTSLTAFAAPKTVTLEVPTMNCVTCPFTVKNALKNVEGVSKAEVTFETK
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHCCCCCCCEEEEEEE
LAVVTFDDEKTTVKALTEATTNAGYPSTLKE
EEEEEECCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9167257 [H]