Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
---|---|
Accession | NC_008568 |
Length | 28,533 |
Click here to switch to the map view.
The map label for this gene is 117621824
Identifier: 117621824
GI number: 117621824
Start: 22338
End: 22457
Strand: Reverse
Name: 117621824
Synonym: BAPKO_4524
Alternate gene names: NA
Gene position: 22457-22338 (Counterclockwise)
Preceding gene: 117621826
Following gene: 117621823
Centisome position: 78.71
GC content: 20.0
Gene sequence:
>120_bases ATGGAAACAAAATCTTTTAATTACTATCAAGCTAGAATAGCAAAATTAATAAATTCTTTTTATAATGAGTGTTACAATTT TATAAGTTGTATTTTTGTTTGGAGAATTAATGTTGAATAA
Upstream 100 bases:
>100_bases ATATATAATTTTTTTGAAAATTTTGGAGATTTACTATAACATACTGGTGGTCACAATACTAAATTCATAGATAATACTAT AATCCTAGTGATATCCTAAA
Downstream 100 bases:
>100_bases ATATTTTAATAATAATATACAGTGTTTTTCTTGCAAGAGATTAATTAAAAATTATGACAAAATTTGTGCCGCTTGTAGGA CTAAAAATAGACAAAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 39
Protein sequence:
>39_residues METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE
Sequences:
>Translated_39_residues METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE >Mature_39_residues METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4820; Mature: 4820
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA