Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621824

Identifier: 117621824

GI number: 117621824

Start: 22338

End: 22457

Strand: Reverse

Name: 117621824

Synonym: BAPKO_4524

Alternate gene names: NA

Gene position: 22457-22338 (Counterclockwise)

Preceding gene: 117621826

Following gene: 117621823

Centisome position: 78.71

GC content: 20.0

Gene sequence:

>120_bases
ATGGAAACAAAATCTTTTAATTACTATCAAGCTAGAATAGCAAAATTAATAAATTCTTTTTATAATGAGTGTTACAATTT
TATAAGTTGTATTTTTGTTTGGAGAATTAATGTTGAATAA

Upstream 100 bases:

>100_bases
ATATATAATTTTTTTGAAAATTTTGGAGATTTACTATAACATACTGGTGGTCACAATACTAAATTCATAGATAATACTAT
AATCCTAGTGATATCCTAAA

Downstream 100 bases:

>100_bases
ATATTTTAATAATAATATACAGTGTTTTTCTTGCAAGAGATTAATTAAAAATTATGACAAAATTTGTGCCGCTTGTAGGA
CTAAAAATAGACAAAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE

Sequences:

>Translated_39_residues
METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE
>Mature_39_residues
METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4820; Mature: 4820

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
METKSFNYYQARIAKLINSFYNECYNFISCIFVWRINVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA