Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621816
Identifier: 117621816
GI number: 117621816
Start: 17467
End: 17592
Strand: Direct
Name: 117621816
Synonym: BAPKO_4516
Alternate gene names: NA
Gene position: 17467-17592 (Clockwise)
Preceding gene: 117621813
Following gene: 117621818
Centisome position: 61.22
GC content: 24.6
Gene sequence:
>126_bases ATGTTTGAAGACTATGATGAAAATGATTTTGATGAGGTTTTTATAAGGTCTACTTTTGATCAACAATTCAAAAGCATAAG AAAATCTTTAAAATTAAAATTAGGAGATTTTGGTGTTTTTGTGTAA
Upstream 100 bases:
>100_bases TCATAGTTGCTTAATGCAAAGATATTTCATTTCTATGAAATTACAAACATAGGTTTCTTCTTTAATACAAAAAAATCATT CTATCTTATCTTTATTATCC
Downstream 100 bases:
>100_bases AATAATTCTCATAATTAAACCAAACAGAATATAAAATAAACAAGTTGCATGTGTAATTATAAGCTAATGGTGCCATAATT AACATTAATATTAATTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 41
Protein sequence:
>41_residues MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV
Sequences:
>Translated_41_residues MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV >Mature_41_residues MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4956; Mature: 4956
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA