Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621816

Identifier: 117621816

GI number: 117621816

Start: 17467

End: 17592

Strand: Direct

Name: 117621816

Synonym: BAPKO_4516

Alternate gene names: NA

Gene position: 17467-17592 (Clockwise)

Preceding gene: 117621813

Following gene: 117621818

Centisome position: 61.22

GC content: 24.6

Gene sequence:

>126_bases
ATGTTTGAAGACTATGATGAAAATGATTTTGATGAGGTTTTTATAAGGTCTACTTTTGATCAACAATTCAAAAGCATAAG
AAAATCTTTAAAATTAAAATTAGGAGATTTTGGTGTTTTTGTGTAA

Upstream 100 bases:

>100_bases
TCATAGTTGCTTAATGCAAAGATATTTCATTTCTATGAAATTACAAACATAGGTTTCTTCTTTAATACAAAAAAATCATT
CTATCTTATCTTTATTATCC

Downstream 100 bases:

>100_bases
AATAATTCTCATAATTAAACCAAACAGAATATAAAATAAACAAGTTGCATGTGTAATTATAAGCTAATGGTGCCATAATT
AACATTAATATTAATTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV

Sequences:

>Translated_41_residues
MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV
>Mature_41_residues
MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4956; Mature: 4956

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFEDYDENDFDEVFIRSTFDQQFKSIRKSLKLKLGDFGVFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA