Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621815
Identifier: 117621815
GI number: 117621815
Start: 16400
End: 17338
Strand: Reverse
Name: 117621815
Synonym: BAPKO_4515
Alternate gene names: NA
Gene position: 17338-16400 (Counterclockwise)
Preceding gene: 117621817
Following gene: 117621814
Centisome position: 60.76
GC content: 29.39
Gene sequence:
>939_bases ATGAAAAAAAATATTTTGGCAAAATACATATTAATATTAGTAAGTTTATTATCATGTAATATAAGTGACCCTAATGAATT AGGAAACAAAAAAACAGAAAAAAAGGGAGGTGGGGGTGTTTTAGGCTTTATAGAGAAAATTCAAGAAGAAAGTATAGAAG GTGTTAAACAACATATAGAAAAAAGAGAAAAACAAACGATGCAGACGGCTTCTATAAAACCTGTTAATGTAAATAGAAAT TTTCTATATTATCCTCAAGAAGAAATAGCAATAAAAGAAGGAGCGTTAATTCCAAGTACTGATGAAGAAAAAAGAGTAGA TAAAGCAATTAGCGATGGGCGTCTTGAATTTGATAAATTAGTTTATGACGAAAATAAGCTTAAAAATGAATTTGAGCAAT TAGAATCTAGTTTTAATAACGTTTATGATAAAATCTTAAAACTTAAAGATGCAATACAAACAGAGGCGCATATTGTAGGA AGAATAAACCATATAATAAAAACAAGACCTGAAAAAAGAGAATATCAGAATAGAGTAAGGCAGAATCAGTCAGAAGAACG AGCTCTAATTAATTTGTTCAATCAATTATTAGAAAAGAGAGGCGATATTGAGGAACTTCATACTCAATTAGATAGCGGAC TTAGTGAAAGAGCATCTGCAAAATACTTTTTTGAGCAATCCCAAAAAACTTTAAAAGATGCCATTACTCAGAGATTAAAA AGCGAACATAGAAGTTGGTCAAGAAGAACATATGGTGGTAATTTGACAAGAAAGGCAAATCGTGAAATAGATAATGCTTT AGAACAATTAAAAACTTCTTCTTCTAAGATAATTAAAGCAATGGAAATAAAGGAAAGGATAGAACAACTTCTTCAAGAAG TAAAATCTTTTCTAGCTTCTTCAAGAAGCAAAATCTGCTTTCATGAGATAGATTTGTAA
Upstream 100 bases:
>100_bases TTTTGTATTAAAGAAGAAACCTATGTTTGTAATTTCATAGAAATGAAATATCTTTGCATTAAGCAACTATGAATCTATAA ATATTCTCACAGGAGAAGAT
Downstream 100 bases:
>100_bases TTTTTTAAAGATAGAAAAATAAAAAAATATATTTAATAAGACTAATATTTAAATTTAAAGCTTTCCTTTAAAAGAAAGCT TTTTATAATTTTATTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: BBK01-Like Protein
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIEKREKQTMQTASIKPVNVNRN FLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKLVYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVG RINHIIKTRPEKREYQNRVRQNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLASSRSKICFHEIDL
Sequences:
>Translated_312_residues MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIEKREKQTMQTASIKPVNVNRN FLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKLVYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVG RINHIIKTRPEKREYQNRVRQNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLASSRSKICFHEIDL >Mature_312_residues MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIEKREKQTMQTASIKPVNVNRN FLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKLVYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVG RINHIIKTRPEKREYQNRVRQNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLASSRSKICFHEIDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36167; Mature: 36167
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIE CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KREKQTMQTASIKPVNVNRNFLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKL HHHHHHHHHHCCCEEECCCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH VYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVGRINHIIKTRPEKREYQNRVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLAS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRSKICFHEIDL CCCCCHHHHCCC >Mature Secondary Structure MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIE CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KREKQTMQTASIKPVNVNRNFLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKL HHHHHHHHHHCCCEEECCCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH VYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVGRINHIIKTRPEKREYQNRVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLAS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRSKICFHEIDL CCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA