Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621815

Identifier: 117621815

GI number: 117621815

Start: 16400

End: 17338

Strand: Reverse

Name: 117621815

Synonym: BAPKO_4515

Alternate gene names: NA

Gene position: 17338-16400 (Counterclockwise)

Preceding gene: 117621817

Following gene: 117621814

Centisome position: 60.76

GC content: 29.39

Gene sequence:

>939_bases
ATGAAAAAAAATATTTTGGCAAAATACATATTAATATTAGTAAGTTTATTATCATGTAATATAAGTGACCCTAATGAATT
AGGAAACAAAAAAACAGAAAAAAAGGGAGGTGGGGGTGTTTTAGGCTTTATAGAGAAAATTCAAGAAGAAAGTATAGAAG
GTGTTAAACAACATATAGAAAAAAGAGAAAAACAAACGATGCAGACGGCTTCTATAAAACCTGTTAATGTAAATAGAAAT
TTTCTATATTATCCTCAAGAAGAAATAGCAATAAAAGAAGGAGCGTTAATTCCAAGTACTGATGAAGAAAAAAGAGTAGA
TAAAGCAATTAGCGATGGGCGTCTTGAATTTGATAAATTAGTTTATGACGAAAATAAGCTTAAAAATGAATTTGAGCAAT
TAGAATCTAGTTTTAATAACGTTTATGATAAAATCTTAAAACTTAAAGATGCAATACAAACAGAGGCGCATATTGTAGGA
AGAATAAACCATATAATAAAAACAAGACCTGAAAAAAGAGAATATCAGAATAGAGTAAGGCAGAATCAGTCAGAAGAACG
AGCTCTAATTAATTTGTTCAATCAATTATTAGAAAAGAGAGGCGATATTGAGGAACTTCATACTCAATTAGATAGCGGAC
TTAGTGAAAGAGCATCTGCAAAATACTTTTTTGAGCAATCCCAAAAAACTTTAAAAGATGCCATTACTCAGAGATTAAAA
AGCGAACATAGAAGTTGGTCAAGAAGAACATATGGTGGTAATTTGACAAGAAAGGCAAATCGTGAAATAGATAATGCTTT
AGAACAATTAAAAACTTCTTCTTCTAAGATAATTAAAGCAATGGAAATAAAGGAAAGGATAGAACAACTTCTTCAAGAAG
TAAAATCTTTTCTAGCTTCTTCAAGAAGCAAAATCTGCTTTCATGAGATAGATTTGTAA

Upstream 100 bases:

>100_bases
TTTTGTATTAAAGAAGAAACCTATGTTTGTAATTTCATAGAAATGAAATATCTTTGCATTAAGCAACTATGAATCTATAA
ATATTCTCACAGGAGAAGAT

Downstream 100 bases:

>100_bases
TTTTTTAAAGATAGAAAAATAAAAAAATATATTTAATAAGACTAATATTTAAATTTAAAGCTTTCCTTTAAAAGAAAGCT
TTTTATAATTTTATTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: BBK01-Like Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIEKREKQTMQTASIKPVNVNRN
FLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKLVYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVG
RINHIIKTRPEKREYQNRVRQNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK
SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLASSRSKICFHEIDL

Sequences:

>Translated_312_residues
MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIEKREKQTMQTASIKPVNVNRN
FLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKLVYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVG
RINHIIKTRPEKREYQNRVRQNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK
SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLASSRSKICFHEIDL
>Mature_312_residues
MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIEKREKQTMQTASIKPVNVNRN
FLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKLVYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVG
RINHIIKTRPEKREYQNRVRQNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK
SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLASSRSKICFHEIDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36167; Mature: 36167

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIE
CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KREKQTMQTASIKPVNVNRNFLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKL
HHHHHHHHHHCCCEEECCCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH
VYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVGRINHIIKTRPEKREYQNRVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLAS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRSKICFHEIDL
CCCCCHHHHCCC
>Mature Secondary Structure
MKKNILAKYILILVSLLSCNISDPNELGNKKTEKKGGGGVLGFIEKIQEESIEGVKQHIE
CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KREKQTMQTASIKPVNVNRNFLYYPQEEIAIKEGALIPSTDEEKRVDKAISDGRLEFDKL
HHHHHHHHHHCCCEEECCCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH
VYDENKLKNEFEQLESSFNNVYDKILKLKDAIQTEAHIVGRINHIIKTRPEKREYQNRVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QNQSEERALINLFNQLLEKRGDIEELHTQLDSGLSERASAKYFFEQSQKTLKDAITQRLK
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEHRSWSRRTYGGNLTRKANREIDNALEQLKTSSSKIIKAMEIKERIEQLLQEVKSFLAS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRSKICFHEIDL
CCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA