Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621704

Identifier: 117621704

GI number: 117621704

Start: 58340

End: 58684

Strand: Direct

Name: 117621704

Synonym: BAPKO_2557

Alternate gene names: NA

Gene position: 58340-58684 (Clockwise)

Preceding gene: 117621703

Following gene: 117621705

Centisome position: 97.55

GC content: 29.86

Gene sequence:

>345_bases
ATGTCAAAAGCTTTTGACGAAATATATTGCCATTCTTGTGGCAAGCCTATTAAAAAAGAAGCTGAAATTTGTATTGCTTG
TGGAGTTAAAAACAAACAAGTTAAAAAATCTTATAATAGATTAGTGGCGGGGTTATTATGCTTATTTTTGGGTTATTTAG
GGGCTCATAGATTTTATGTGGGAAAAATGGGGACCGGTACTACGTTTTTATGTATAATGCTTATTTCCCCTGTATTTTAC
CTATTTACCCTAGGTTTTGGATTAATAATTATTTTGCCCGTATTAGCAATACTAGAAATTATTGTTTTGATTGATTTAAT
ACGAATTGTCGTTAATAAATTTTAA

Upstream 100 bases:

>100_bases
TGTCGCTCTATATTTATAATGTTTATCAAATATAAAAATACAACTTACTTATCTCAATATATTTTATATACGTATATTGT
ATTTTTAAAGGAGATTAATC

Downstream 100 bases:

>100_bases
AAAAGAATAATTTGATTAAAATTTTTAGCTTTTGGTAAAATATAAATTGCAATTTTTATCTATATTAAAGTCGTCTACTT
TTTAATATGTGTGTCTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSKAFDEIYCHSCGKPIKKEAEICIACGVKNKQVKKSYNRLVAGLLCLFLGYLGAHRFYVGKMGTGTTFLCIMLISPVFY
LFTLGFGLIIILPVLAILEIIVLIDLIRIVVNKF

Sequences:

>Translated_114_residues
MSKAFDEIYCHSCGKPIKKEAEICIACGVKNKQVKKSYNRLVAGLLCLFLGYLGAHRFYVGKMGTGTTFLCIMLISPVFY
LFTLGFGLIIILPVLAILEIIVLIDLIRIVVNKF
>Mature_113_residues
SKAFDEIYCHSCGKPIKKEAEICIACGVKNKQVKKSYNRLVAGLLCLFLGYLGAHRFYVGKMGTGTTFLCIMLISPVFYL
FTLGFGLIIILPVLAILEIIVLIDLIRIVVNKF

Specific function: Unknown

COG id: COG2314

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12707; Mature: 12576

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAFDEIYCHSCGKPIKKEAEICIACGVKNKQVKKSYNRLVAGLLCLFLGYLGAHRFYV
CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKMGTGTTFLCIMLISPVFYLFTLGFGLIIILPVLAILEIIVLIDLIRIVVNKF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKAFDEIYCHSCGKPIKKEAEICIACGVKNKQVKKSYNRLVAGLLCLFLGYLGAHRFYV
CCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKMGTGTTFLCIMLISPVFYLFTLGFGLIIILPVLAILEIIVLIDLIRIVVNKF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA