Click here to switch to the map view.

The map label for this gene is 117621697

Identifier: 117621697

GI number: 117621697

Start: 49361

End: 49819

Strand: Reverse

Name: 117621697

Synonym: BAPKO_2550

Alternate gene names: NA

Gene position: 49819-49361 (Counterclockwise)

Preceding gene: 117621698

Following gene: 117621696

Centisome position: 83.3

GC content: 29.63

Gene sequence:

>459_bases
ATGAATTATAAGAATTTCTTTTCTAGAAAGGACGCACTTTCTAAATTAAACTTGAGTGCGATTGAATATTGTGTTTTAGG
TGATATGAAGCGTGTTATTTCTGAATTGAAAAATAATTTTTCCAAAGATGAAAATTGTAATTTCATGTTGCCTTTGTTTG
AAAATAATCATGAAAAATGTTTTGATAATTTCCTTGTGAAGTTAGGGCCTAATAGAGCTAAACAACTAATTAGCTTGTTC
CGAAAAATTAAAACAAGAATAAGTGACAGTCTGTTTGAAACAGAGGTTCTTTTACTGTACTTGTGCATTGAAGATGAGGA
TATGTGTTTAGCAAATCTTCTGTATTGTGGTGGTGAAGACAATTGTTTTGATTGTATGGGGTCTGATCTTGATCAACAAT
TTAAAAATATAATTAGGACATTAATTTCTACGCTGGAGGATTTTGGTATTTTTGTTTAA

Upstream 100 bases:

>100_bases
AATTGAATTTTTAGAAAAGCGTACTACTCAATAGTAGTAATTAAGTAATAATATTTTGTGCTACAAATAGCGCAAAATAT
TATTACTTAAGTAGTAAGAA

Downstream 100 bases:

>100_bases
GATTATTTGTAAGTTTTACGACTTTGTTAAATTTAGGATAGAGAGGATTGTATATGGCTGCGAAGGTCATGAGTATTTCA
CATTATTTTGTCTATATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNYKNFFSRKDALSKLNLSAIEYCVLGDMKRVISELKNNFSKDENCNFMLPLFENNHEKCFDNFLVKLGPNRAKQLISLF
RKIKTRISDSLFETEVLLLYLCIEDEDMCLANLLYCGGEDNCFDCMGSDLDQQFKNIIRTLISTLEDFGIFV

Sequences:

>Translated_152_residues
MNYKNFFSRKDALSKLNLSAIEYCVLGDMKRVISELKNNFSKDENCNFMLPLFENNHEKCFDNFLVKLGPNRAKQLISLF
RKIKTRISDSLFETEVLLLYLCIEDEDMCLANLLYCGGEDNCFDCMGSDLDQQFKNIIRTLISTLEDFGIFV
>Mature_152_residues
MNYKNFFSRKDALSKLNLSAIEYCVLGDMKRVISELKNNFSKDENCNFMLPLFENNHEKCFDNFLVKLGPNRAKQLISLF
RKIKTRISDSLFETEVLLLYLCIEDEDMCLANLLYCGGEDNCFDCMGSDLDQQFKNIIRTLISTLEDFGIFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17674; Mature: 17674

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKNFFSRKDALSKLNLSAIEYCVLGDMKRVISELKNNFSKDENCNFMLPLFENNHEKC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
FDNFLVKLGPNRAKQLISLFRKIKTRISDSLFETEVLLLYLCIEDEDMCLANLLYCGGED
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
NCFDCMGSDLDQQFKNIIRTLISTLEDFGIFV
CHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYKNFFSRKDALSKLNLSAIEYCVLGDMKRVISELKNNFSKDENCNFMLPLFENNHEKC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
FDNFLVKLGPNRAKQLISLFRKIKTRISDSLFETEVLLLYLCIEDEDMCLANLLYCGGED
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
NCFDCMGSDLDQQFKNIIRTLISTLEDFGIFV
CHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA