Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

Click here to switch to the map view.

The map label for this gene is 117621686

Identifier: 117621686

GI number: 117621686

Start: 39691

End: 39885

Strand: Direct

Name: 117621686

Synonym: BAPKO_2539

Alternate gene names: NA

Gene position: 39691-39885 (Clockwise)

Preceding gene: 117621678

Following gene: 117621687

Centisome position: 66.37

GC content: 25.13

Gene sequence:

>195_bases
TTGGGCTATACTACAATCAGTGTAGAAAAATATTTTCATATTGACTACCTATTTATTTTTGATCATTTTATGAGAGGCAA
GCAGGGCTTATATAAGTTCTTTAATAAGAGAATTTATACAAGCCCTGAGCTTTTTATAAAAATTTTTGCTACAAATTTGG
TAAAAATAGTTTTTGATATTTTTAGTTATTTGTAA

Upstream 100 bases:

>100_bases
ACTTTTATTCAAAATTTCATAAAAATTAATAATTTATTTTAATGTTTCTGATTAAGAAGATTACATTTTATTATAAAGAT
AAATTGATTTTAATTCTAAG

Downstream 100 bases:

>100_bases
AAATAATAAATTAAGGAAAAAAATATTAAGAATATGTTTATTAATAATAATTTTAATTTAGGTCTAAAAACCATTCAACA
AAGAAATTTTTAATTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MGYTTISVEKYFHIDYLFIFDHFMRGKQGLYKFFNKRIYTSPELFIKIFATNLVKIVFDIFSYL

Sequences:

>Translated_64_residues
MGYTTISVEKYFHIDYLFIFDHFMRGKQGLYKFFNKRIYTSPELFIKIFATNLVKIVFDIFSYL
>Mature_63_residues
GYTTISVEKYFHIDYLFIFDHFMRGKQGLYKFFNKRIYTSPELFIKIFATNLVKIVFDIFSYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7820; Mature: 7689

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYTTISVEKYFHIDYLFIFDHFMRGKQGLYKFFNKRIYTSPELFIKIFATNLVKIVFDI
CCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FSYL
HHHC
>Mature Secondary Structure 
GYTTISVEKYFHIDYLFIFDHFMRGKQGLYKFFNKRIYTSPELFIKIFATNLVKIVFDI
CCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FSYL
HHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA