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The map label for this gene is sopA [C]

Identifier: 117621683

GI number: 117621683

Start: 37128

End: 37880

Strand: Reverse

Name: sopA [C]

Synonym: BAPKO_2536

Alternate gene names: 117621683

Gene position: 37880-37128 (Counterclockwise)

Preceding gene: 117621684

Following gene: 117621682

Centisome position: 63.34

GC content: 25.37

Gene sequence:

>753_bases
ATGGATAGAAAAAAACCAAAAATAATAACCATTGCAAGCCTTAAAGGTGGTGTTGGGAAAAGTACAACCTCAATAATACT
TGCAAATTTATTAGCACAGAAGTATAAAGTACTTTTAATAGATATAGATGATCAGGCTGCTACTACAAGCTATTATTATA
ATGAATTGGAAACAAAAAATTTTGATGTTTCTAAAATAAATATAGGAAATGTTATAAAAGATGGTATGGATATTAATAAA
AGTATTATTAATGTTGATAATAATATAGCTTTGATACCTAGTTATATAACAGTTGATGAATTAAATGGAGATTATTATTA
TGATAACCGACACCTATCTATTGAATTTTCATTAAAGACAAAATTAAATTCTATAATAGATAACTATGATTATGTCATAA
TTGATACTAATCCCAAAAGGAATTTTACATTAAAGATTTCTCTAATTAGTAGCAACTATGTAATATCTCCAATGACAGCA
GAAAAATGGGCAGTTGAAGGATTTGAAACATTGAGAAGGTTTATAAAAGAAGTGGCTGGAATACCGGTGTTTATTACTGT
AACAAGATTTAAAAAAAATGTTACCCATAAACAATTAATGGAAATAGTAAGTATGAAAAATGGGTTTTTAGGATGTATAA
GCGAAAGGGAAGATTTAAATAAAAGAATAGGGTGTAATGAAAAATTTGATTTTACAAAAGACTATATTATTGAATATAAA
AAAATATTGGAAACTTTTTTAGGGAAATTATAA

Upstream 100 bases:

>100_bases
CACCCTATAATATAGCATGTATTGATATGTTTACAAAATTAGAAAAACATGTATATGAATTTTATGATAAAGAATATCCA
GAAGAAGGAATACTTATAAG

Downstream 100 bases:

>100_bases
AAATCAATAAACTTAATAAGTTCGGCACGCCGGATTGATTGAGCATAAAGGAGAAGATATGAATAAAAAAAGTGTTAATT
TAAAAATTAACAAAAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDRKKPKIITIASLKGGVGKSTTSIILANLLAQKYKVLLIDIDDQAATTSYYYNELETKNFDVSKINIGNVIKDGMDINK
SIINVDNNIALIPSYITVDELNGDYYYDNRHLSIEFSLKTKLNSIIDNYDYVIIDTNPKRNFTLKISLISSNYVISPMTA
EKWAVEGFETLRRFIKEVAGIPVFITVTRFKKNVTHKQLMEIVSMKNGFLGCISEREDLNKRIGCNEKFDFTKDYIIEYK
KILETFLGKL

Sequences:

>Translated_250_residues
MDRKKPKIITIASLKGGVGKSTTSIILANLLAQKYKVLLIDIDDQAATTSYYYNELETKNFDVSKINIGNVIKDGMDINK
SIINVDNNIALIPSYITVDELNGDYYYDNRHLSIEFSLKTKLNSIIDNYDYVIIDTNPKRNFTLKISLISSNYVISPMTA
EKWAVEGFETLRRFIKEVAGIPVFITVTRFKKNVTHKQLMEIVSMKNGFLGCISEREDLNKRIGCNEKFDFTKDYIIEYK
KILETFLGKL
>Mature_250_residues
MDRKKPKIITIASLKGGVGKSTTSIILANLLAQKYKVLLIDIDDQAATTSYYYNELETKNFDVSKINIGNVIKDGMDINK
SIINVDNNIALIPSYITVDELNGDYYYDNRHLSIEFSLKTKLNSIIDNYDYVIIDTNPKRNFTLKISLISSNYVISPMTA
EKWAVEGFETLRRFIKEVAGIPVFITVTRFKKNVTHKQLMEIVSMKNGFLGCISEREDLNKRIGCNEKFDFTKDYIIEYK
KILETFLGKL

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28643; Mature: 28643

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKKPKIITIASLKGGVGKSTTSIILANLLAQKYKVLLIDIDDQAATTSYYYNELETKN
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCC
FDVSKINIGNVIKDGMDINKSIINVDNNIALIPSYITVDELNGDYYYDNRHLSIEFSLKT
CCEEEEECCHHHHCCCCCCCEEEECCCCEEEEEEEEEEEECCCCEEECCEEEEEEEEEHH
KLNSIIDNYDYVIIDTNPKRNFTLKISLISSNYVISPMTAEKWAVEGFETLRRFIKEVAG
HHHHHHCCCCEEEEECCCCCCEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHCC
IPVFITVTRFKKNVTHKQLMEIVSMKNGFLGCISEREDLNKRIGCNEKFDFTKDYIIEYK
CEEEEEEEEHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCHHHHHHHH
KILETFLGKL
HHHHHHHCCC
>Mature Secondary Structure
MDRKKPKIITIASLKGGVGKSTTSIILANLLAQKYKVLLIDIDDQAATTSYYYNELETKN
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCC
FDVSKINIGNVIKDGMDINKSIINVDNNIALIPSYITVDELNGDYYYDNRHLSIEFSLKT
CCEEEEECCHHHHCCCCCCCEEEECCCCEEEEEEEEEEEECCCCEEECCEEEEEEEEEHH
KLNSIIDNYDYVIIDTNPKRNFTLKISLISSNYVISPMTAEKWAVEGFETLRRFIKEVAG
HHHHHHCCCCEEEEECCCCCCEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHCC
IPVFITVTRFKKNVTHKQLMEIVSMKNGFLGCISEREDLNKRIGCNEKFDFTKDYIIEYK
CEEEEEEEEHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCHHHHHHHH
KILETFLGKL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]