Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621677
Identifier: 117621677
GI number: 117621677
Start: 34078
End: 34218
Strand: Direct
Name: 117621677
Synonym: BAPKO_2530
Alternate gene names: NA
Gene position: 34078-34218 (Clockwise)
Preceding gene: 117621675
Following gene: 117621678
Centisome position: 56.98
GC content: 24.82
Gene sequence:
>141_bases TTGCTTTCTTCAAATAGTTCAAAAACAAGTAAAGAAAAATCAACTTTAAAAAATTCGAGAAAAGATAAAATCCTAGTATC AAAATCAAGAAAAAATTTAGCTGATTTAGCTGAAACAGATATAGCAATAAAAGTAGCTTGA
Upstream 100 bases:
>100_bases AACAGAGGAGTAAAAAAATGTTATTTAAAAAATAATAAAAACCCTTATCTTACTGTTTTGCTTATTGCTATCATGTATAA CAGAACAAAATTTAGATAGG
Downstream 100 bases:
>100_bases GAAGAAGCTATAGATAATAAGGGAACATAAGAATTGGCATCGATCGGCGGTTCAATTACTGTATCAACAGAAAAAACTCA GAATCAATTGGGTAAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MLSSNSSKTSKEKSTLKNSRKDKILVSKSRKNLADLAETDIAIKVA
Sequences:
>Translated_46_residues MLSSNSSKTSKEKSTLKNSRKDKILVSKSRKNLADLAETDIAIKVA >Mature_46_residues MLSSNSSKTSKEKSTLKNSRKDKILVSKSRKNLADLAETDIAIKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5036; Mature: 5036
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSNSSKTSKEKSTLKNSRKDKILVSKSRKNLADLAETDIAIKVA CCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCEEEEEC >Mature Secondary Structure MLSSNSSKTSKEKSTLKNSRKDKILVSKSRKNLADLAETDIAIKVA CCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA