| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872400
Identifier: 116872400
GI number: 116872400
Start: 1005053
End: 1005844
Strand: Direct
Name: 116872400
Synonym: lwe0982
Alternate gene names: NA
Gene position: 1005053-1005844 (Clockwise)
Preceding gene: 116872397
Following gene: 116872403
Centisome position: 35.71
GC content: 31.19
Gene sequence:
>792_bases ATGTTAGAAAAAAACTATAAATTTTTACTTTGGATCTATATATTTTGGTTTCTAGGAAGCGTATTACTTGTTTCTTTACA CATTATTCCACCACAGCTAACAACTATTCAATCGCTTTTTCTAGTATTTACTGGGGTTTTTGCAGCAGTGTTTTTTATTA TGCAGTACGGTAAATGGCTAGGATCTGCAATCACTTTACTTATTTTTGTTGTGAGTACTTGTATTGAATGGATGCAGTTA AGTTATACGGACGAATATATTGGATCCACACTCGGTGGTAGTGTTTACGGAATACCAATTACAATGGGCTTTATTTGGGT CGGAATGATTGCGGGAACACATATTATCGCACGTGAAATAACACTGAAAATTAATATTGACTGGATACGAGGCGGGATTT ATTCTTTTATTGCAGCGACGATGGTAATGATTTTTGAAGTATTAATTGAACCAATTACACTGCAATCAAAGCAACTTTAT ATCACGCAAAATGGCTTTACTATATTACAATTATCAGATTTTATTAATTGGTGGTTATTGGGGTTAATTTTACATTTGAT GATTTACTTTATTTTAAGTTTGACGGATAGCTGGGAAAAGCTTAAATATCCTGATTTAAAATCAGAAATCGTGATTGTTT ACTGGATTATCATTGCATTTTTTGTATTTTTATCATTTTATCTTGATTTATGGACATCTATTGCAATTATTATCATTTCC AATATTATATTTACAGCCTGTTACTTCTTTAGCTTAGAAAAAGAGACGAAAACACCAAAAAAACCCAAGTAA
Upstream 100 bases:
>100_bases AAACAAATGAAATCGTTTGGCAACAATTAAACGAAAGATAAGATAAAAGTTGTGCAATTTAATAAATCCTTTATAATTAA AAAATAGGAGTGGTTCATAG
Downstream 100 bases:
>100_bases TCGATTTACTGATTACTTGGGTTTTCTTTTTGCAAAAATTTTCGTGTGGTGATTTGTGCATTTTCGATAATAAAAGGTAA GGAGCTACCAGAAAGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPQLTTIQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL SYTDEYIGSTLGGSVYGIPITMGFIWVGMIAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITLQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWEKLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIIS NIIFTACYFFSLEKETKTPKKPK
Sequences:
>Translated_263_residues MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPQLTTIQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL SYTDEYIGSTLGGSVYGIPITMGFIWVGMIAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITLQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWEKLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIIS NIIFTACYFFSLEKETKTPKKPK >Mature_263_residues MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPQLTTIQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQL SYTDEYIGSTLGGSVYGIPITMGFIWVGMIAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITLQSKQLY ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWEKLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIIS NIIFTACYFFSLEKETKTPKKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30485; Mature: 30485
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPQLTTIQSLFLVFTGVFAAVFFIMQYGKWL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMIAGTHIIAREI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHEEEEE TLKINIDWIRGGIYSFIAATMVMIFEVLIEPITLQSKQLYITQNGFTILQLSDFINWWLL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEHHHHHHHHHH GLILHLMIYFILSLTDSWEKLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIIS HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIIFTACYFFSLEKETKTPKKPK HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPQLTTIQSLFLVFTGVFAAVFFIMQYGKWL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMIAGTHIIAREI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHEEEEE TLKINIDWIRGGIYSFIAATMVMIFEVLIEPITLQSKQLYITQNGFTILQLSDFINWWLL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEHHHHHHHHHH GLILHLMIYFILSLTDSWEKLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIIS HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIIFTACYFFSLEKETKTPKKPK HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA