Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872313

Identifier: 116872313

GI number: 116872313

Start: 923970

End: 925073

Strand: Direct

Name: 116872313

Synonym: lwe0895

Alternate gene names: NA

Gene position: 923970-925073 (Clockwise)

Preceding gene: 116872312

Following gene: 116872314

Centisome position: 32.83

GC content: 34.15

Gene sequence:

>1104_bases
ATGGAAATCATCATTTATATTTTTGTAAGTATTGCTATCATTTCACTACAAGCAATGACACCTTTTGTTATACGGAAGTC
TGAATGTTTTGGGGTAAATGTTGGCGAGCGAGCTAATCGAAACGCTGAGCTAACCCAATTAAAAAAACAATATATTGGTC
AAGTTGTTTTATGGACCTCGTTAGTGGCTATCATCGGGATTGCTTTTATTCAAGGTTTTCATTCAAGCGAAAACATCCAA
GCAGGAATTTTTATCGCCTCCATGTTTGGACAATTAATAGTTTCTTTCATTATTTACTATCGTTTTCATCAAACAACCTT
ACAATGGAAAAAAGAAAAAATAGAGTCAGGAGAAATTTCAACCAATTCTATTATCATGGTAGATACTAGTTTTCATCGTA
GAAAAATGGTGATTTCTTACACTTGGTTTATAGTGCCCTTACTTTTATTTATTATTACACTTGCAATAACCGCTGTTTTT
TATCCAAGTGCTCCGGAAACTTGGATAACTCATTTTGATATGAACGGGGTAAGCACAAATACGGTTCAAAAATCACCAAG
AATAGCTCTACTTTTCCCAATGCTGCAACTAGGGATGATTGGCTTATTTATGTTTATTAATTATGTTATAGCCAGAAGTA
AACAAACAGTAGAAAATGAAAATCCAACAGATTCTTTAAAACGGAATATGTTATTTAGACAAATTTCTAGCAAGGCTATG
CTAATTATGTGTATGATCATGGTCATTGATTTTCTCGTTATGCAAGTGGTTATTTTACTCGCATTATCAGCAGAAATTAT
GATGATTACTATGATTATTTCCGTCATTTTAATTTTACTGGGAACAGTTCTTCTTGCTGTAAAAGTAGGACAGGGTGGAA
GCCGATTAAAATTCGCAAATGAGCCAGACGGAGTAAACAAGCCAATCCGTGATGACGACGTTTTCTGGAAAGCGGGAGTA
ATTTACTTCAACAGAAATGACCCAGCATTATTCGTTGAGAAACGTTTTGGTATCGGTTGGACAATAAATACAGCTCGTCC
AGTTGCTTGGTTATCTTTTGTATTTGTTATCGTAGTCATTATCTTCATTAGTTTCTTGTTTTAA

Upstream 100 bases:

>100_bases
TGATTGCAGAATCAGTTGTTCGTGATGTTAGTGAAGAGAAATGGTTAGAAATAAGTAAGACTATTTTTGATGAAATGCAT
GGACGGAGAGTGGATTAGAG

Downstream 100 bases:

>100_bases
GTATATTTAAGTTAATAATCAACACTTCCCACAAAAAATTTTCTGGCCCTGAACTCTTGTTTGGGGCTTTTTTATAGTAG
CAAGCTTTTTTTGAGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MEIIIYIFVSIAIISLQAMTPFVIRKSECFGVNVGERANRNAELTQLKKQYIGQVVLWTSLVAIIGIAFIQGFHSSENIQ
AGIFIASMFGQLIVSFIIYYRFHQTTLQWKKEKIESGEISTNSIIMVDTSFHRRKMVISYTWFIVPLLLFIITLAITAVF
YPSAPETWITHFDMNGVSTNTVQKSPRIALLFPMLQLGMIGLFMFINYVIARSKQTVENENPTDSLKRNMLFRQISSKAM
LIMCMIMVIDFLVMQVVILLALSAEIMMITMIISVILILLGTVLLAVKVGQGGSRLKFANEPDGVNKPIRDDDVFWKAGV
IYFNRNDPALFVEKRFGIGWTINTARPVAWLSFVFVIVVIIFISFLF

Sequences:

>Translated_367_residues
MEIIIYIFVSIAIISLQAMTPFVIRKSECFGVNVGERANRNAELTQLKKQYIGQVVLWTSLVAIIGIAFIQGFHSSENIQ
AGIFIASMFGQLIVSFIIYYRFHQTTLQWKKEKIESGEISTNSIIMVDTSFHRRKMVISYTWFIVPLLLFIITLAITAVF
YPSAPETWITHFDMNGVSTNTVQKSPRIALLFPMLQLGMIGLFMFINYVIARSKQTVENENPTDSLKRNMLFRQISSKAM
LIMCMIMVIDFLVMQVVILLALSAEIMMITMIISVILILLGTVLLAVKVGQGGSRLKFANEPDGVNKPIRDDDVFWKAGV
IYFNRNDPALFVEKRFGIGWTINTARPVAWLSFVFVIVVIIFISFLF
>Mature_367_residues
MEIIIYIFVSIAIISLQAMTPFVIRKSECFGVNVGERANRNAELTQLKKQYIGQVVLWTSLVAIIGIAFIQGFHSSENIQ
AGIFIASMFGQLIVSFIIYYRFHQTTLQWKKEKIESGEISTNSIIMVDTSFHRRKMVISYTWFIVPLLLFIITLAITAVF
YPSAPETWITHFDMNGVSTNTVQKSPRIALLFPMLQLGMIGLFMFINYVIARSKQTVENENPTDSLKRNMLFRQISSKAM
LIMCMIMVIDFLVMQVVILLALSAEIMMITMIISVILILLGTVLLAVKVGQGGSRLKFANEPDGVNKPIRDDDVFWKAGV
IYFNRNDPALFVEKRFGIGWTINTARPVAWLSFVFVIVVIIFISFLF

Specific function: Unknown

COG id: COG4194

COG function: function code R; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41689; Mature: 41689

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIIYIFVSIAIISLQAMTPFVIRKSECFGVNVGERANRNAELTQLKKQYIGQVVLWTS
CEEEHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVAIIGIAFIQGFHSSENIQAGIFIASMFGQLIVSFIIYYRFHQTTLQWKKEKIESGEIS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TNSIIMVDTSFHRRKMVISYTWFIVPLLLFIITLAITAVFYPSAPETWITHFDMNGVSTN
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCC
TVQKSPRIALLFPMLQLGMIGLFMFINYVIARSKQTVENENPTDSLKRNMLFRQISSKAM
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
LIMCMIMVIDFLVMQVVILLALSAEIMMITMIISVILILLGTVLLAVKVGQGGSRLKFAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCC
EPDGVNKPIRDDDVFWKAGVIYFNRNDPALFVEKRFGIGWTINTARPVAWLSFVFVIVVI
CCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHHH
IFISFLF
HHHHHHC
>Mature Secondary Structure
MEIIIYIFVSIAIISLQAMTPFVIRKSECFGVNVGERANRNAELTQLKKQYIGQVVLWTS
CEEEHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVAIIGIAFIQGFHSSENIQAGIFIASMFGQLIVSFIIYYRFHQTTLQWKKEKIESGEIS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TNSIIMVDTSFHRRKMVISYTWFIVPLLLFIITLAITAVFYPSAPETWITHFDMNGVSTN
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCC
TVQKSPRIALLFPMLQLGMIGLFMFINYVIARSKQTVENENPTDSLKRNMLFRQISSKAM
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
LIMCMIMVIDFLVMQVVILLALSAEIMMITMIISVILILLGTVLLAVKVGQGGSRLKFAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCC
EPDGVNKPIRDDDVFWKAGVIYFNRNDPALFVEKRFGIGWTINTARPVAWLSFVFVIVVI
CCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHHH
IFISFLF
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA