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The map label for this gene is ydbT [H]

Identifier: 116872285

GI number: 116872285

Start: 898901

End: 900382

Strand: Direct

Name: ydbT [H]

Synonym: lwe0865

Alternate gene names: 116872285

Gene position: 898901-900382 (Clockwise)

Preceding gene: 116872284

Following gene: 116872286

Centisome position: 31.94

GC content: 36.37

Gene sequence:

>1482_bases
ATGTTTGAAGAAAGACGCCTTCATCCAATTGCGCTGATTAAAGAAATTATCACAAATATAAGACGTAATATTGTTCCAAT
CGTAGTTGGTTTGTTTTCTGTATTTCGCGCAATTAATAGCAGAGGTTACTTACCAAACTGGGCTGTATACCTTATCATTG
TTATTGTTGTACTGCTCGTTTTAACTCCCGCGGTTTTAAAGTACATTACATATAAATACACACTCGAAGATCAAGGGATT
CGTATTAAATATGGTTTGATTTTCAGAAAAAACACTTACATACCTTATGAACGCATTCAAACTGTTCAAAAGAAACAATG
GTTTTTCTTTATTCCATTTAATGTCTGCCAAGTTTTAATTGAAACAGCTGGCGGAAATGGAAAAGCAGAAGCCGATTTAG
TCGCAGTTCCAGTTGGCGTAGTGGATGAGTTGAAAGATTTACGTGATGGCAAAAAAGCGGCAATTCAAGAAGTCACGCCA
GAAACTGAAGAAAAAGAAGTAGCAGAAGCAGAGGTAGAAGCGCCAGAAAAAACAGTGGTGTTACAAACAAAACAACTTAT
TTTAATGGCAGTAACATCAGGTGGCGTTTTCGGTACACTTTTAATCGTTCTTGCTTTTATGCAACAATTCCGGGATGTTA
TTCCAACAGACTGGATGGAAACGCAAGCAGAACAACTGTGGAAAATGGGCATTATTGTGTTTATCATTTTGATTATCTTA
TTACTTTTAGTTTTATGGGGAATCTCCATTGTGACAACGCTTTTCAAATATTTCCAATTCAAACTAATGAAATATCCCCA
TTCGCTTGTCATCGAAAAAGGACTATTAGAACGGAACCATACGACGATTTCACTTGCTCGTATCCAAGGCATTACCATTA
TTGAATCACCATTACGACAAATGCTCGGTTTAGTAGCGGTCAAAGTAATTACAGCTGGCAATTCAGGCGATGAAAAACAA
TCGGGAGACATCTTACTTTTACCAATTATGAAAAAAGATTTAGCTTTAAAAACATTAAAAGAAATGCTACCAAATTACGT
ATTTGAAATTGAAGAAATGGAACGTGCTCCAAAATCAAGTTTGCGCAGATTTTTGCGAATTTACTTAATCTGGACTATCA
TTCCAGCCCTTGTAGCAAGTATAATGTTCTTCCCACTGGGTCTGGTAAGTTTCATTTTACCAATTTTAGCTGGAATAAAA
GCCATCTCTAGCTACCGAGCAACTGGTCTTTTCACTCATAAACACACACTGCTCGTTCAATCGCGACCATTTATTTCAAA
GTTAACTCACATTATCCGTAAAGAACGAATTCAAGGCTTAAGTATAAGACAAAGCATTTGGATGGAAAAAGGGACATCAC
GACATTTAAATGTGTGGCTCAAATCAGGAAGTACGAGCACGGAGGCATTTGTTCGTTATATAAATAAAGATCAAGCTATC
ACGATTCATAATTGGTACAGCCCATCAAAAACGAATAATTAA

Upstream 100 bases:

>100_bases
ACTACAGCTGCAAAGACGCATAAAATTGAAGCAGTAAACGCGGCAGAGTCAGATGAGCTTAGACATCATATCCTTGAACT
TGTGAAGGTGGCGAAAGAAG

Downstream 100 bases:

>100_bases
TAAACGGAACATTCGAATCTTAAAAAACTGCGCACGTTAGCATGGTTTTTAAGAAGCGGGTGTTCTTTTATTTTTTGTTC
AATTAAGCAGAAATCTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MFEERRLHPIALIKEIITNIRRNIVPIVVGLFSVFRAINSRGYLPNWAVYLIIVIVVLLVLTPAVLKYITYKYTLEDQGI
RIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQVLIETAGGNGKAEADLVAVPVGVVDELKDLRDGKKAAIQEVTP
ETEEKEVAEAEVEAPEKTVVLQTKQLILMAVTSGGVFGTLLIVLAFMQQFRDVIPTDWMETQAEQLWKMGIIVFIILIIL
LLLVLWGISIVTTLFKYFQFKLMKYPHSLVIEKGLLERNHTTISLARIQGITIIESPLRQMLGLVAVKVITAGNSGDEKQ
SGDILLLPIMKKDLALKTLKEMLPNYVFEIEEMERAPKSSLRRFLRIYLIWTIIPALVASIMFFPLGLVSFILPILAGIK
AISSYRATGLFTHKHTLLVQSRPFISKLTHIIRKERIQGLSIRQSIWMEKGTSRHLNVWLKSGSTSTEAFVRYINKDQAI
TIHNWYSPSKTNN

Sequences:

>Translated_493_residues
MFEERRLHPIALIKEIITNIRRNIVPIVVGLFSVFRAINSRGYLPNWAVYLIIVIVVLLVLTPAVLKYITYKYTLEDQGI
RIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQVLIETAGGNGKAEADLVAVPVGVVDELKDLRDGKKAAIQEVTP
ETEEKEVAEAEVEAPEKTVVLQTKQLILMAVTSGGVFGTLLIVLAFMQQFRDVIPTDWMETQAEQLWKMGIIVFIILIIL
LLLVLWGISIVTTLFKYFQFKLMKYPHSLVIEKGLLERNHTTISLARIQGITIIESPLRQMLGLVAVKVITAGNSGDEKQ
SGDILLLPIMKKDLALKTLKEMLPNYVFEIEEMERAPKSSLRRFLRIYLIWTIIPALVASIMFFPLGLVSFILPILAGIK
AISSYRATGLFTHKHTLLVQSRPFISKLTHIIRKERIQGLSIRQSIWMEKGTSRHLNVWLKSGSTSTEAFVRYINKDQAI
TIHNWYSPSKTNN
>Mature_493_residues
MFEERRLHPIALIKEIITNIRRNIVPIVVGLFSVFRAINSRGYLPNWAVYLIIVIVVLLVLTPAVLKYITYKYTLEDQGI
RIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQVLIETAGGNGKAEADLVAVPVGVVDELKDLRDGKKAAIQEVTP
ETEEKEVAEAEVEAPEKTVVLQTKQLILMAVTSGGVFGTLLIVLAFMQQFRDVIPTDWMETQAEQLWKMGIIVFIILIIL
LLLVLWGISIVTTLFKYFQFKLMKYPHSLVIEKGLLERNHTTISLARIQGITIIESPLRQMLGLVAVKVITAGNSGDEKQ
SGDILLLPIMKKDLALKTLKEMLPNYVFEIEEMERAPKSSLRRFLRIYLIWTIIPALVASIMFFPLGLVSFILPILAGIK
AISSYRATGLFTHKHTLLVQSRPFISKLTHIIRKERIQGLSIRQSIWMEKGTSRHLNVWLKSGSTSTEAFVRYINKDQAI
TIHNWYSPSKTNN

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 56254; Mature: 56254

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEERRLHPIALIKEIITNIRRNIVPIVVGLFSVFRAINSRGYLPNWAVYLIIVIVVLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQVLI
HHHHHHHHHHHEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHHH
ETAGGNGKAEADLVAVPVGVVDELKDLRDGKKAAIQEVTPETEEKEVAEAEVEAPEKTVV
HHCCCCCCCCCCEEEECHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEE
LQTKQLILMAVTSGGVFGTLLIVLAFMQQFRDVIPTDWMETQAEQLWKMGIIVFIILIIL
EEHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLVLWGISIVTTLFKYFQFKLMKYPHSLVIEKGLLERNHTTISLARIQGITIIESPLRQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHH
MLGLVAVKVITAGNSGDEKQSGDILLLPIMKKDLALKTLKEMLPNYVFEIEEMERAPKSS
HHHHHHHHHEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LRRFLRIYLIWTIIPALVASIMFFPLGLVSFILPILAGIKAISSYRATGLFTHKHTLLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEE
SRPFISKLTHIIRKERIQGLSIRQSIWMEKGTSRHLNVWLKSGSTSTEAFVRYINKDQAI
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEE
TIHNWYSPSKTNN
EEEECCCCCCCCC
>Mature Secondary Structure
MFEERRLHPIALIKEIITNIRRNIVPIVVGLFSVFRAINSRGYLPNWAVYLIIVIVVLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQVLI
HHHHHHHHHHHEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHHH
ETAGGNGKAEADLVAVPVGVVDELKDLRDGKKAAIQEVTPETEEKEVAEAEVEAPEKTVV
HHCCCCCCCCCCEEEECHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEE
LQTKQLILMAVTSGGVFGTLLIVLAFMQQFRDVIPTDWMETQAEQLWKMGIIVFIILIIL
EEHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLVLWGISIVTTLFKYFQFKLMKYPHSLVIEKGLLERNHTTISLARIQGITIIESPLRQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHH
MLGLVAVKVITAGNSGDEKQSGDILLLPIMKKDLALKTLKEMLPNYVFEIEEMERAPKSS
HHHHHHHHHEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LRRFLRIYLIWTIIPALVASIMFFPLGLVSFILPILAGIKAISSYRATGLFTHKHTLLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEE
SRPFISKLTHIIRKERIQGLSIRQSIWMEKGTSRHLNVWLKSGSTSTEAFVRYINKDQAI
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEE
TIHNWYSPSKTNN
EEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]