| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is murF [H]
Identifier: 116872269
GI number: 116872269
Start: 881447
End: 882859
Strand: Direct
Name: murF [H]
Synonym: lwe0849
Alternate gene names: 116872269
Gene position: 881447-882859 (Clockwise)
Preceding gene: 116872268
Following gene: 116872270
Centisome position: 31.32
GC content: 37.93
Gene sequence:
>1413_bases ATGCGGAAGCTGCTTTTTTATGGAAGAGAGCGATTTGATTTGAAGAAAACAGTAGGCGAAGTAGTAGCAATGTTAGATAG TTCCATTCATGTAGATACATTTCGCGATGTCGTCATTACTGGCATTTGTTTTGATACAAGGCAAATAAAGTCAGGTGATT TATTTGTTCCATTTGTGGGGAATTTGCGCGATGGACACGAATTTGTAAGTCAAGCAAGAGAAATGGGAGCAGTTGCGACC TTCTGGCAAAAAGATGTACCGAATCCACCAACGGATTTTCCAGTTATTTTAGTGGACAACACATTGTTATCGCTTCAAGA ATTGGCAGCGAAATATATACAACAAGTAAAACCGAAAGTGATTGCAATTACAGGAAGCAATGGGAAAACAACTACAAAAG ATATTATGGCAGCTATTGTTGAAACGACCTATAAAGTGCATTATACAGGTGGAAACTTTAATAACCATATTGGGTTACCA TATACTATTCTCACCATGCCGGAAGATACAGAAGTAGCTGTGCTTGAGATGGGTATGAATCATCGTCATGAAATCGAAGT GCTTTCTAAAATTGCCAAACCTGATATTGCGATTATTACGAATATCGGTGAAGCTCATATTGAATATCTAGGTTCACGTG AAGAAATAGCGAAAGCCAAACTCGAAATTACGGCGGGCTTAAACCCAAGCGGGATTTTAATTTATCCACACGAAGAGACT TTGTTGTTAAGTAATATTAATGGGGATTTCAGACAGCTCACTTTTGGAAAATCAGAAGCTGCAGAAATTTATCCATTAGA AATTCATGCGGAAGCAGAAGGAACTTCTTTTGTAACAAATTGGGAACCAGAACTCGAAATTTTTGTTCCAATTATTGGCG AACATAACGTGTTCAACACAATGGCCGCAATGCTTGCAGCAAGAGAAATTGGTATTGAAGGCGAAAAAATTCAATCTGCA CTTAAAAAAATGGAACGTTCCAAAAGTCGTTTAGAGTGGATTACAACAAAAAGCGGGGCGCGAATTTTAAATGACGCATA TAATTCTAGTCCGACAGCTTTAAAAACGGTGTTAAAAACATTTATGCACATGGATTCAAAAGGAAAACCAAAATATTTGG TGCTTGCAGATATGTTAGAATTAGGTGAGTTGTCGACAAAGCTGCATCGAGAATCGGCCGAAGTCTTGGAAAAAGATACG ATTGAGAAGGTTTTCTTGTATGGTGAGGCAATGAAAGCATTTGGAACTGTAGCTGAAACAAAAATTGGTCAGGGAAAAGT TCAACATTTTGACACAAAGGAATCGCTTGAGACGGCGCTTCTTTCGGAAGTGAATGGAAATGAATGGATACTGGTCAAAG GTTCTTACGGAATGGGCTTGAAAGATGTAGTAGAAAATCTTATTATTAAGTAA
Upstream 100 bases:
>100_bases AATTGAAAGATTAGTTGATTTAGCAAAAGAACGACATGCCGCAAAAAATGCACTTAAATATAAATTAGAAGACTAAAATA AACAAGAAAGCAGTTTTCAT
Downstream 100 bases:
>100_bases CGACTAAAATTGGACATATGATATTACCGATTAATTGGTAATAATTTGGACAGGAGGAAAGGCATAATGGTTGCTTGTTT GTGTATTCATGGTTTTACTG
Product: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6- diaminopimelate-D
Products: NA
Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MRKLLFYGRERFDLKKTVGEVVAMLDSSIHVDTFRDVVITGICFDTRQIKSGDLFVPFVGNLRDGHEFVSQAREMGAVAT FWQKDVPNPPTDFPVILVDNTLLSLQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLP YTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEET LLLSNINGDFRQLTFGKSEAAEIYPLEIHAEAEGTSFVTNWEPELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSA LKKMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSKGKPKYLVLADMLELGELSTKLHRESAEVLEKDT IEKVFLYGEAMKAFGTVAETKIGQGKVQHFDTKESLETALLSEVNGNEWILVKGSYGMGLKDVVENLIIK
Sequences:
>Translated_470_residues MRKLLFYGRERFDLKKTVGEVVAMLDSSIHVDTFRDVVITGICFDTRQIKSGDLFVPFVGNLRDGHEFVSQAREMGAVAT FWQKDVPNPPTDFPVILVDNTLLSLQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLP YTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEET LLLSNINGDFRQLTFGKSEAAEIYPLEIHAEAEGTSFVTNWEPELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSA LKKMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSKGKPKYLVLADMLELGELSTKLHRESAEVLEKDT IEKVFLYGEAMKAFGTVAETKIGQGKVQHFDTKESLETALLSEVNGNEWILVKGSYGMGLKDVVENLIIK >Mature_470_residues MRKLLFYGRERFDLKKTVGEVVAMLDSSIHVDTFRDVVITGICFDTRQIKSGDLFVPFVGNLRDGHEFVSQAREMGAVAT FWQKDVPNPPTDFPVILVDNTLLSLQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLP YTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEET LLLSNINGDFRQLTFGKSEAAEIYPLEIHAEAEGTSFVTNWEPELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSA LKKMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSKGKPKYLVLADMLELGELSTKLHRESAEVLEKDT IEKVFLYGEAMKAFGTVAETKIGQGKVQHFDTKESLETALLSEVNGNEWILVKGSYGMGLKDVVENLIIK
Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786274, Length=441, Percent_Identity=31.9727891156463, Blast_Score=189, Evalue=3e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005863 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.10 [H]
Molecular weight: Translated: 52320; Mature: 52320
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLFYGRERFDLKKTVGEVVAMLDSSIHVDTFRDVVITGICFDTRQIKSGDLFVPFVG CCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCCCCEEEEECC NLRDGHEFVSQAREMGAVATFWQKDVPNPPTDFPVILVDNTLLSLQELAAKYIQQVKPKV CCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEE IAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVAVLEMGMN EEEECCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCC HRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEET CCHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHHHHEEEEEEECCCCCCEEEEECCCE LLLSNINGDFRQLTFGKSEAAEIYPLEIHAEAEGTSFVTNWEPELEIFVPIIGEHNVFNT EEEECCCCCHHEEECCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEEECCCCHHHHH MAAMLAAREIGIEGEKIQSALKKMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCHHHHHHHHH FMHMDSKGKPKYLVLADMLELGELSTKLHRESAEVLEKDTIEKVFLYGEAMKAFGTVAET HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIGQGKVQHFDTKESLETALLSEVNGNEWILVKGSYGMGLKDVVENLIIK CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCC >Mature Secondary Structure MRKLLFYGRERFDLKKTVGEVVAMLDSSIHVDTFRDVVITGICFDTRQIKSGDLFVPFVG CCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCCCCEEEEECC NLRDGHEFVSQAREMGAVATFWQKDVPNPPTDFPVILVDNTLLSLQELAAKYIQQVKPKV CCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEE IAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVAVLEMGMN EEEECCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCC HRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEET CCHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHHHHEEEEEEECCCCCCEEEEECCCE LLLSNINGDFRQLTFGKSEAAEIYPLEIHAEAEGTSFVTNWEPELEIFVPIIGEHNVFNT EEEECCCCCHHEEECCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEEECCCCHHHHH MAAMLAAREIGIEGEKIQSALKKMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCHHHHHHHHH FMHMDSKGKPKYLVLADMLELGELSTKLHRESAEVLEKDTIEKVFLYGEAMKAFGTVAET HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIGQGKVQHFDTKESLETALLSEVNGNEWILVKGSYGMGLKDVVENLIIK CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]