Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

Click here to switch to the map view.

The map label for this gene is 116872264

Identifier: 116872264

GI number: 116872264

Start: 878087

End: 878845

Strand: Direct

Name: 116872264

Synonym: lwe0844

Alternate gene names: NA

Gene position: 878087-878845 (Clockwise)

Preceding gene: 116872263

Following gene: 116872265

Centisome position: 31.2

GC content: 32.94

Gene sequence:

>759_bases
ATGAAAAAAGAAGCGGTTAATCAACAATCTATTTATGTTCATATTGATCATGTTATTAACAATGTGGCGACAAGCGGCAT
TTCTTTTTGTGATTTCTTAAATGGTGTAGGGCAACCCCCTGAAAATATTTTGTTAATCAAACATAATATAGAAGATGCGT
CCTATAATGCACATACAGCTTTTCACTACTTAGAGCCTGGCGATTTAGCAAATATTTCCAAAGAGAATTTTAATCCTTTT
TGTTGGATTGATTTTGAGGATGTAGAGCTTTTAAACCAACTGACACCACAAGAAGTTGCTGAAATGCTGTATCTTGCGCA
TACTGGGCGGCACCTTCGTTCTCCTTTTTATTATAAATTACAAAATAATTTTGTTTATTTAACGAGACAAGATGGACGTT
ATAATAAAGTATATTACCGGAATTTAAATCATTTTTATATGTTGTTAAGTCATGTGATTGCGCGGAAAACATCAGAGCTT
GTTAATGAAAAAGGTATTTTCTCATTTGGTAAGAAAAAATATGTGGCGGAACCACCAGTCGAACTATTGAAAAAAATGGC
TGATTATTTTAAAGACGGTGCTTGTATAGCGCTGGAAGATGTCGTTAGAACTCGAACACAAATTGAAGTCCCTATTGGTT
TAGGGTTAACAGAAGAGATGACAGAGCTAGAAATTTCTTCTAAAATCTATTATGAAGAAGAAGTAGCAAAACTAGTATAT
GATTTGAAACAGAATGAATGGAAATATATCGAAAAATAA

Upstream 100 bases:

>100_bases
AGATTTGATGTTTCTGTTATCCTTTTTCAGTAAAAATGTTGTATGATGGAATGGAAGGCTTTTGTCATAGAAGAAAATAG
AATTAGAGTGAGGCAAATAC

Downstream 100 bases:

>100_bases
AAAATCAAACTTTTTCCTTTACGTTTGGTTTTTTATTTGCTAGAATGTGACTAATGAACGTTAGTTAGGAGGGCTTTTAA
TGACGAAACAACTAATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENILLIKHNIEDASYNAHTAFHYLEPGDLANISKENFNPF
CWIDFEDVELLNQLTPQEVAEMLYLAHTGRHLRSPFYYKLQNNFVYLTRQDGRYNKVYYRNLNHFYMLLSHVIARKTSEL
VNEKGIFSFGKKKYVAEPPVELLKKMADYFKDGACIALEDVVRTRTQIEVPIGLGLTEEMTELEISSKIYYEEEVAKLVY
DLKQNEWKYIEK

Sequences:

>Translated_252_residues
MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENILLIKHNIEDASYNAHTAFHYLEPGDLANISKENFNPF
CWIDFEDVELLNQLTPQEVAEMLYLAHTGRHLRSPFYYKLQNNFVYLTRQDGRYNKVYYRNLNHFYMLLSHVIARKTSEL
VNEKGIFSFGKKKYVAEPPVELLKKMADYFKDGACIALEDVVRTRTQIEVPIGLGLTEEMTELEISSKIYYEEEVAKLVY
DLKQNEWKYIEK
>Mature_252_residues
MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENILLIKHNIEDASYNAHTAFHYLEPGDLANISKENFNPF
CWIDFEDVELLNQLTPQEVAEMLYLAHTGRHLRSPFYYKLQNNFVYLTRQDGRYNKVYYRNLNHFYMLLSHVIARKTSEL
VNEKGIFSFGKKKYVAEPPVELLKKMADYFKDGACIALEDVVRTRTQIEVPIGLGLTEEMTELEISSKIYYEEEVAKLVY
DLKQNEWKYIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29390; Mature: 29390

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENILLIKHNIEDASYNAHTA
CCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEE
FHYLEPGDLANISKENFNPFCWIDFEDVELLNQLTPQEVAEMLYLAHTGRHLRSPFYYKL
EEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCEEEEE
QNNFVYLTRQDGRYNKVYYRNLNHFYMLLSHVIARKTSELVNEKGIFSFGKKKYVAEPPV
ECCEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHH
ELLKKMADYFKDGACIALEDVVRTRTQIEVPIGLGLTEEMTELEISSKIYYEEEVAKLVY
HHHHHHHHHHCCCCEEEHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLKQNEWKYIEK
HHHCCCCCCCCC
>Mature Secondary Structure
MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENILLIKHNIEDASYNAHTA
CCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEE
FHYLEPGDLANISKENFNPFCWIDFEDVELLNQLTPQEVAEMLYLAHTGRHLRSPFYYKL
EEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCEEEEE
QNNFVYLTRQDGRYNKVYYRNLNHFYMLLSHVIARKTSELVNEKGIFSFGKKKYVAEPPV
ECCEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHH
ELLKKMADYFKDGACIALEDVVRTRTQIEVPIGLGLTEEMTELEISSKIYYEEEVAKLVY
HHHHHHHHHHCCCCEEEHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLKQNEWKYIEK
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA