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The map label for this gene is int [H]

Identifier: 116872216

GI number: 116872216

Start: 827306

End: 828466

Strand: Direct

Name: int [H]

Synonym: lwe0796

Alternate gene names: 116872216

Gene position: 827306-828466 (Clockwise)

Preceding gene: 116872215

Following gene: 116872219

Centisome position: 29.4

GC content: 33.51

Gene sequence:

>1161_bases
ATGGTAAAAATTAACAATATATATCAAGATAAGAAAACAAAAAAATGGTTCTTTCGTGCATATCTAGGAACAGATATGGA
TGGTAAAAAAATCCAAAAAACAAAAAGAGGATATGGATCGCAAAGAGATGCTAAGAGAGGCTATGACCAATATATGCTTA
CTCATGGATTTCATCAAACTTTATCTTCACATCTAAGTTCTGCTAGTCAAATGACTTTTGAAGAATTCTATCGAATACGT
TTTGTTAATTGGTATGAAAAGCAAGTAAAAAGTCAAACATTCGAGAACGCCCAGTTCATTTTTGAAAAGAAAATGGAGTA
TTTCTATCGAATGCGAATAAGAGATATTAGTAGTCAGGATATTGAGGATTGGATGCATGAATTAAGCCAAACAGCGACTA
GAAATTCTAGGAAACAAGAAGAAATCACAACATTGTCTAGAACCTATATTAATCGCATTCTAGGACATCTGAGAATTATT
TTGAATCGAGCTGTTAAAGAAGGTTTGATTGAGCGAAATCCAGTAGATAGCGTGTCTTATTTCCCAAAAGAAAATAATAA
AGTTGAATTTTGGGAAATTGAAGAGTTTCAAAAAGTGATGGCTATGATTCCTGAAAATTCTATTCAGAATCAACATAGAA
AAATCATATATGAAATGCTTTTCTATACTGGACTACGAATTGGAGAACTTCAAGCTTTGTCTTGGGAAAATGTTAACTTT
GAGAAAAATCAGATAACAGTTGAGAAGACACTTATCTATCAAGGTAAAAACGATTGGTACTTTTCTACACCTAAAACCAA
TAAGTCTTATCGAACTATTAGTATTGGAAAGACTCTCAGTAAAAGATTGAAGAAGTGGCAAGAACTACAAAGAATGATTG
GAAACTTTGAATACATGTCGCAATTAGACGGAACATTTACGCCATCCTATTCGTTTTCTAATTGGTTAAAGGACTCTGCA
AGAAAAGCTGGTGTCATTCCAATTAAGCTTCATGCCTTACGACATTCTCATGTAGCCTTGTTAATCGACCAGAATATTCA
ACCGCTTGTGATACAAGAGAGATTAGGACATGCGAATATACAGATTACTTTGGGAACATATGGACATCTTTATGCGAAGT
CTGATAGCCAAGTTGTTGATGTTCTGGACAAGATAATCTGA

Upstream 100 bases:

>100_bases
ACCAGCGAGAGTTGTTGAAAAATTATTCAATATACAAGTGTCGGGATAAGTATTATAATGAGATTAGGCTCATTATTCTC
TATCCTAACGAGGAGAATAT

Downstream 100 bases:

>100_bases
ATAAAGCAATCTCAGGAATAGTAAAAGTAAACCAATTGTTCTGAGTTTTCCAATATTCTACCAATGCTGTTAAGAATGTT
GATATATCAACGGACTTTAC

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MVKINNIYQDKKTKKWFFRAYLGTDMDGKKIQKTKRGYGSQRDAKRGYDQYMLTHGFHQTLSSHLSSASQMTFEEFYRIR
FVNWYEKQVKSQTFENAQFIFEKKMEYFYRMRIRDISSQDIEDWMHELSQTATRNSRKQEEITTLSRTYINRILGHLRII
LNRAVKEGLIERNPVDSVSYFPKENNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNF
EKNQITVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKWQELQRMIGNFEYMSQLDGTFTPSYSFSNWLKDSA
RKAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHANIQITLGTYGHLYAKSDSQVVDVLDKII

Sequences:

>Translated_386_residues
MVKINNIYQDKKTKKWFFRAYLGTDMDGKKIQKTKRGYGSQRDAKRGYDQYMLTHGFHQTLSSHLSSASQMTFEEFYRIR
FVNWYEKQVKSQTFENAQFIFEKKMEYFYRMRIRDISSQDIEDWMHELSQTATRNSRKQEEITTLSRTYINRILGHLRII
LNRAVKEGLIERNPVDSVSYFPKENNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNF
EKNQITVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKWQELQRMIGNFEYMSQLDGTFTPSYSFSNWLKDSA
RKAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHANIQITLGTYGHLYAKSDSQVVDVLDKII
>Mature_386_residues
MVKINNIYQDKKTKKWFFRAYLGTDMDGKKIQKTKRGYGSQRDAKRGYDQYMLTHGFHQTLSSHLSSASQMTFEEFYRIR
FVNWYEKQVKSQTFENAQFIFEKKMEYFYRMRIRDISSQDIEDWMHELSQTATRNSRKQEEITTLSRTYINRILGHLRII
LNRAVKEGLIERNPVDSVSYFPKENNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNF
EKNQITVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKWQELQRMIGNFEYMSQLDGTFTPSYSFSNWLKDSA
RKAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHANIQITLGTYGHLYAKSDSQVVDVLDKII

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1787607, Length=289, Percent_Identity=24.9134948096886, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786748, Length=337, Percent_Identity=23.4421364985163, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45864; Mature: 45864

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKINNIYQDKKTKKWFFRAYLGTDMDGKKIQKTKRGYGSQRDAKRGYDQYMLTHGFHQT
CEEECCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHH
LSSHLSSASQMTFEEFYRIRFVNWYEKQVKSQTFENAQFIFEKKMEYFYRMRIRDISSQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IEDWMHELSQTATRNSRKQEEITTLSRTYINRILGHLRIILNRAVKEGLIERNPVDSVSY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHC
FPKENNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNF
CCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
EKNQITVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKWQELQRMIGNFEYMS
CCCEEEEEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHH
QLDGTFTPSYSFSNWLKDSARKAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHANI
HCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHCCCCEE
QITLGTYGHLYAKSDSQVVDVLDKII
EEEEECCEEEEECCCCHHHHHHHHHC
>Mature Secondary Structure
MVKINNIYQDKKTKKWFFRAYLGTDMDGKKIQKTKRGYGSQRDAKRGYDQYMLTHGFHQT
CEEECCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHH
LSSHLSSASQMTFEEFYRIRFVNWYEKQVKSQTFENAQFIFEKKMEYFYRMRIRDISSQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IEDWMHELSQTATRNSRKQEEITTLSRTYINRILGHLRIILNRAVKEGLIERNPVDSVSY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHC
FPKENNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNF
CCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
EKNQITVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKWQELQRMIGNFEYMS
CCCEEEEEEEEEEECCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHH
QLDGTFTPSYSFSNWLKDSARKAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHANI
HCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHCCCCEE
QITLGTYGHLYAKSDSQVVDVLDKII
EEEEECCEEEEECCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]