| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872207
Identifier: 116872207
GI number: 116872207
Start: 818627
End: 819928
Strand: Direct
Name: 116872207
Synonym: lwe0787
Alternate gene names: NA
Gene position: 818627-819928 (Clockwise)
Preceding gene: 116872206
Following gene: 116872208
Centisome position: 29.09
GC content: 31.34
Gene sequence:
>1302_bases ATGATATTCAATATACAAACTTATTTTGTTCATATTTATGAATGTGGTTTGCAGTATTTATTAATATATTTTCTTTTTTC ACGATATAAACCAATAAAACTACGAGTGTCAAAACAGAAACTAATTTTAATTTTTAGCATAATTATCTTAGTACATGCTT TTTTTGCTACATTTGAGTATTTTACCATCAATGTAATAGTTTCTGGGGTATTATATCTAGTTGTGTCTTTTTTCTTTTTT ACAAGGTGGCAAGATATCTTGATGTCTTCAATCATTGCTACAGCAGTAATCGATATTGGAGAAGGTGTTGCTTCAATGTT ATTAATGAGTACAGCGATAGGAAGTCAAGAGGTAGCAGAATTTATGTTGAAACCTTCAAATACAATGCTACTATTTACTA TTTCTCGTTTGATTAGTTTGGGATTAGTGCTGATTATGTTAAGATTTAGAAAAATACGAACAGGAAGTGGCAATTTACCG ACAATTTATTGGACAACATTTTTATTTATTATGATGAAAGACATTTTATGGGTGTTAATCTTAACGGATTCCCCTGTAGA AATATCCTTCTACTATTGGGCAGCAGTTATTCCACTCTTACCAATATCCTATATTTTGTTTTATTATACACGTCGCTCGA TAGAAAAAATGATAAAAACGCAAGTAGACAGGAAAGTGTTAGATGAAAAAAATAAATATTATGAACAACAGCTCGTTGCA ATGGAACAAACACTTGAATCACAAAGAACGATTCGTCATGATCTAAAAAATAAGTTATCTCCACTAATTTATCTGGCAGA AAGTGGTAAGACAGATAAATTGGTTAAGCAGGTACAAGAGCTTGGTAGTTTAAGTGTACTTGGTAAAATCTATGCAGAAT CAGGAAATATAATGATTGACTATATTATTAATCTAAAATTGCAACCCCTAGCGAATAAAGACGTAGTAATATCTTGCGAG ACAAATGTGCCCAATGATATTGATGTTGCACCCTTTGATTTATCGACGATTTTAGGGAACTTAATTGATAATGCGGCTGA GGCATTGGAGTATGCGCCAAATGAAAAGTGGATTAGGATTAAAGTAAGTTATCAAGTTGGCTTTTTGATGATACAAGTAT CAAACTCTTTTGATGGAGTTGTGCACTTAGATAAGAAGAAAATCATTTCTAGAAAAGGGAACATTGATAATCATGGGATT GGTTTAGCTAGCATTGAAACAATTGCCAAAGAGTATAATGGTGAAATGATTGTTCGGTATGATGAGCAACAATTTAATAT GATTGTAAAATTATTGGCTTAA
Upstream 100 bases:
>100_bases AATATAGTAAAGGAACAATTTTTAAGAGAAAGTGATAAACATTTATAAGGTATTTTTAGCCCGTATTTATTAAATTAAGA ATAGTATCAGGGAGGTAACA
Downstream 100 bases:
>100_bases ATTTGATATGAGAGACGTTTCTTTCAACGGGAAACGTTTTTTTATTTTCATGTATTAAATTGCAAGGGGTAAGATAATTA ACTATTGGAATTTCTAGAGA
Product: two-component sensor histidine kinases, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEYFTINVIVSGVLYLVVSFFFF TRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAEFMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLP TIYWTTFLFIMMKDILWVLILTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMIDYIINLKLQPLANKDVVISCE TNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRIKVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGI GLASIETIAKEYNGEMIVRYDEQQFNMIVKLLA
Sequences:
>Translated_433_residues MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEYFTINVIVSGVLYLVVSFFFF TRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAEFMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLP TIYWTTFLFIMMKDILWVLILTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMIDYIINLKLQPLANKDVVISCE TNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRIKVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGI GLASIETIAKEYNGEMIVRYDEQQFNMIVKLLA >Mature_433_residues MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEYFTINVIVSGVLYLVVSFFFF TRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAEFMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLP TIYWTTFLFIMMKDILWVLILTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMIDYIINLKLQPLANKDVVISCE TNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRIKVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGI GLASIETIAKEYNGEMIVRYDEQQFNMIVKLLA
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49757; Mature: 49757
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEY CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH FTINVIVSGVLYLVVSFFFFTRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLPTIYWTTFLFIMMKDILWVLI HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEE LTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA ECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMID HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE YIINLKLQPLANKDVVISCETNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRI EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE KVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGIGLASIETIAKEYNGEMIVRY EEEEEEEEEEEEECCCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE DEQQFNMIVKLLA CHHHHHHHHHHHC >Mature Secondary Structure MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEY CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH FTINVIVSGVLYLVVSFFFFTRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLPTIYWTTFLFIMMKDILWVLI HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEE LTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA ECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMID HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE YIINLKLQPLANKDVVISCETNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRI EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE KVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGIGLASIETIAKEYNGEMIVRY EEEEEEEEEEEEECCCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE DEQQFNMIVKLLA CHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA