Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872207

Identifier: 116872207

GI number: 116872207

Start: 818627

End: 819928

Strand: Direct

Name: 116872207

Synonym: lwe0787

Alternate gene names: NA

Gene position: 818627-819928 (Clockwise)

Preceding gene: 116872206

Following gene: 116872208

Centisome position: 29.09

GC content: 31.34

Gene sequence:

>1302_bases
ATGATATTCAATATACAAACTTATTTTGTTCATATTTATGAATGTGGTTTGCAGTATTTATTAATATATTTTCTTTTTTC
ACGATATAAACCAATAAAACTACGAGTGTCAAAACAGAAACTAATTTTAATTTTTAGCATAATTATCTTAGTACATGCTT
TTTTTGCTACATTTGAGTATTTTACCATCAATGTAATAGTTTCTGGGGTATTATATCTAGTTGTGTCTTTTTTCTTTTTT
ACAAGGTGGCAAGATATCTTGATGTCTTCAATCATTGCTACAGCAGTAATCGATATTGGAGAAGGTGTTGCTTCAATGTT
ATTAATGAGTACAGCGATAGGAAGTCAAGAGGTAGCAGAATTTATGTTGAAACCTTCAAATACAATGCTACTATTTACTA
TTTCTCGTTTGATTAGTTTGGGATTAGTGCTGATTATGTTAAGATTTAGAAAAATACGAACAGGAAGTGGCAATTTACCG
ACAATTTATTGGACAACATTTTTATTTATTATGATGAAAGACATTTTATGGGTGTTAATCTTAACGGATTCCCCTGTAGA
AATATCCTTCTACTATTGGGCAGCAGTTATTCCACTCTTACCAATATCCTATATTTTGTTTTATTATACACGTCGCTCGA
TAGAAAAAATGATAAAAACGCAAGTAGACAGGAAAGTGTTAGATGAAAAAAATAAATATTATGAACAACAGCTCGTTGCA
ATGGAACAAACACTTGAATCACAAAGAACGATTCGTCATGATCTAAAAAATAAGTTATCTCCACTAATTTATCTGGCAGA
AAGTGGTAAGACAGATAAATTGGTTAAGCAGGTACAAGAGCTTGGTAGTTTAAGTGTACTTGGTAAAATCTATGCAGAAT
CAGGAAATATAATGATTGACTATATTATTAATCTAAAATTGCAACCCCTAGCGAATAAAGACGTAGTAATATCTTGCGAG
ACAAATGTGCCCAATGATATTGATGTTGCACCCTTTGATTTATCGACGATTTTAGGGAACTTAATTGATAATGCGGCTGA
GGCATTGGAGTATGCGCCAAATGAAAAGTGGATTAGGATTAAAGTAAGTTATCAAGTTGGCTTTTTGATGATACAAGTAT
CAAACTCTTTTGATGGAGTTGTGCACTTAGATAAGAAGAAAATCATTTCTAGAAAAGGGAACATTGATAATCATGGGATT
GGTTTAGCTAGCATTGAAACAATTGCCAAAGAGTATAATGGTGAAATGATTGTTCGGTATGATGAGCAACAATTTAATAT
GATTGTAAAATTATTGGCTTAA

Upstream 100 bases:

>100_bases
AATATAGTAAAGGAACAATTTTTAAGAGAAAGTGATAAACATTTATAAGGTATTTTTAGCCCGTATTTATTAAATTAAGA
ATAGTATCAGGGAGGTAACA

Downstream 100 bases:

>100_bases
ATTTGATATGAGAGACGTTTCTTTCAACGGGAAACGTTTTTTTATTTTCATGTATTAAATTGCAAGGGGTAAGATAATTA
ACTATTGGAATTTCTAGAGA

Product: two-component sensor histidine kinases, putative

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEYFTINVIVSGVLYLVVSFFFF
TRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAEFMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLP
TIYWTTFLFIMMKDILWVLILTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA
MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMIDYIINLKLQPLANKDVVISCE
TNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRIKVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGI
GLASIETIAKEYNGEMIVRYDEQQFNMIVKLLA

Sequences:

>Translated_433_residues
MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEYFTINVIVSGVLYLVVSFFFF
TRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAEFMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLP
TIYWTTFLFIMMKDILWVLILTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA
MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMIDYIINLKLQPLANKDVVISCE
TNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRIKVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGI
GLASIETIAKEYNGEMIVRYDEQQFNMIVKLLA
>Mature_433_residues
MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEYFTINVIVSGVLYLVVSFFFF
TRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAEFMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLP
TIYWTTFLFIMMKDILWVLILTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA
MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMIDYIINLKLQPLANKDVVISCE
TNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRIKVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGI
GLASIETIAKEYNGEMIVRYDEQQFNMIVKLLA

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49757; Mature: 49757

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEY
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
FTINVIVSGVLYLVVSFFFFTRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLPTIYWTTFLFIMMKDILWVLI
HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEE
LTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA
ECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMID
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE
YIINLKLQPLANKDVVISCETNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRI
EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
KVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGIGLASIETIAKEYNGEMIVRY
EEEEEEEEEEEEECCCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
DEQQFNMIVKLLA
CHHHHHHHHHHHC
>Mature Secondary Structure
MIFNIQTYFVHIYECGLQYLLIYFLFSRYKPIKLRVSKQKLILIFSIIILVHAFFATFEY
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
FTINVIVSGVLYLVVSFFFFTRWQDILMSSIIATAVIDIGEGVASMLLMSTAIGSQEVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FMLKPSNTMLLFTISRLISLGLVLIMLRFRKIRTGSGNLPTIYWTTFLFIMMKDILWVLI
HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEE
LTDSPVEISFYYWAAVIPLLPISYILFYYTRRSIEKMIKTQVDRKVLDEKNKYYEQQLVA
ECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEQTLESQRTIRHDLKNKLSPLIYLAESGKTDKLVKQVQELGSLSVLGKIYAESGNIMID
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEE
YIINLKLQPLANKDVVISCETNVPNDIDVAPFDLSTILGNLIDNAAEALEYAPNEKWIRI
EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
KVSYQVGFLMIQVSNSFDGVVHLDKKKIISRKGNIDNHGIGLASIETIAKEYNGEMIVRY
EEEEEEEEEEEEECCCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
DEQQFNMIVKLLA
CHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA