Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is pgi [H]
Identifier: 116689938
GI number: 116689938
Start: 2128489
End: 2130159
Strand: Direct
Name: pgi [H]
Synonym: Bcen2424_1917
Alternate gene names: 116689938
Gene position: 2128489-2130159 (Clockwise)
Preceding gene: 116689937
Following gene: 116689940
Centisome position: 61.09
GC content: 67.32
Gene sequence:
>1671_bases ATGAGCCGGCGCGGCATTCCTCCCGATTCACGCTTCACTCGAACCGCCATGACGCTGAAATCGCTCCCCGCCTGGACTGC CCTTCAATCCCACTTCGAACAGATCCGCCACGCGCGGCTGCGCGACTGGTTCGCGCCGGAAAACGATCGCGCGCCGACCC GCGCCGAACGCTTCACGATTCCGGGCGGCGGTCTCGCGGCCGATTTCTCGAAGAATCGCATCGACGACGAAACGCTGCGC CTGCTCGTGCAGCTCGCGCGCGACGCCGGCGTCGAGGCGCGCCGCGACGCGATGTTCGCGGGCGAGATCGTCAACCCGAC CGAAGGCCGCGCCGCGCTGCACACCGCGCTGCGCGCGACCGACCCGCAAGCGCCGTTCCATGCGCAGGTGAGCGCCGAGC GCGCGAAGATGGCGACGTTCGCGCGCGCCGTGCGCAGCGGCACGTGGACGGGCTATACGGGCAAGCGCATTCGCCACGTG ATCAACATCGGCATCGGCGGCTCCGATCTCGGCCCGAAGATGGTCGTGCATGCGCTGCACCACGTCGCGACGCCCGAGAT CTCGACGCACTTCGTGTCGAACGTCGACGGCGCCGATCTCGCGCGCGTGCTCGAACAGGTCGATCCCGAGGAAACGCTCG CGATCATCGTGTCGAAGACCTTCACGACGCTCGAGACGATGACGAACGCACGCTCGCTGCGCGACTGGTTCGTCGCGCGC GGCTGCCCCGAGGATGCGCTCGCGAAGCACTTCGTCGGCGTGTCGGCGAACCCGGCCGAAGTCGTGAAGTTCGGCATCGC CGCGGACAACGTGTTCGAAATGTGGGACTGGGTCGGCGGCCGCTATTCGCTGTGGTCGGCGGTCGGCCTGTCGATCATGA TCGCGATCGGCCCCGAACAGTTCGACGAACTGCTGGCCGGCGCGAACGACATGGACCGCCACTTCCGCGAAGCGCCGCTC GAGCGCAACCTCCCGGTGCTGCTCGGCCTGATCGGCATCTGGTACCGGAATTTCTTCGGCTCGCAGAGCTATCTCGTCGC GCCGTATTCGGAAGCGCTGCACTACCTGCCGTCTTACCTGCAGCAGCTCGAAATGGAGAGCAACGGCAAATCCGCGCGCC TCGACGGCACCTTCGTCGACTACCCGACGTCGGCCGTCACGTGGGGTGAGCCGGGCACCAACGGCCAGCATGCGTTCTTC CAGATGCTGCACCAGGGGCCGACGATCGTGCCGATCGACTTCATCGCGGTGCTGACGCCCGAACATCCGCTCGCGGGCCA TCATCCGAAGCTGCTCGCGAACTGCTTCGCGCAGAGCGAAGCGCTGATGCTCGGCCGCACGCTCGAGGAAGCGCGCAAGG TCGCCGGGCCCGGCAAGGAAGCGCTCGCGCCGCACCTGACGTTCCCCGGCAACCGCCCGACCACGACGCTGCTCGTCGAT GCGCTGACACCGCGCACGCTCGGCGCGTTGATCGCGCTTTACGAGCACAAGGTGCTCGTGCAGGCGACGGTGTGGGACAT CAATCCGTTCGACCAGTGGGGCGTCGAGCTCGGCAAGATTCTCGGCAAGGTGGTCGAAGGCGACCTGTCGGCCGAATCGG TCGATCCGGCGAAGCACGACTCGTCGACCACGGCGCTGATCGAGCGCGCCCGCGCGGCACTCAAGCGTTGA
Upstream 100 bases:
>100_bases TCGCCTTTTTTACCCGTCGCCGCGCGCCGACACGTAACGCCGCTATACTGACTGCCCCGCCGCACGGCGGGCCTTCTCGT CCGCCGGCTTTCCGATCCCG
Downstream 100 bases:
>100_bases CGCGCTGACGCGACGGCGTCATGCCCGTGCCGGCCGTGCGATTGACGCCGCGCGGCCGGCACGACCATTCACGCGTTGCG CGATGCCGCGTGCGGCGCGA
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSRRGIPPDSRFTRTAMTLKSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADFSKNRIDDETLR LLVQLARDAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPQAPFHAQVSAERAKMATFARAVRSGTWTGYTGKRIRHV INIGIGGSDLGPKMVVHALHHVATPEISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR GCPEDALAKHFVGVSANPAEVVKFGIAADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFREAPL ERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFF QMLHQGPTIVPIDFIAVLTPEHPLAGHHPKLLANCFAQSEALMLGRTLEEARKVAGPGKEALAPHLTFPGNRPTTTLLVD ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEGDLSAESVDPAKHDSSTTALIERARAALKR
Sequences:
>Translated_556_residues MSRRGIPPDSRFTRTAMTLKSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADFSKNRIDDETLR LLVQLARDAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPQAPFHAQVSAERAKMATFARAVRSGTWTGYTGKRIRHV INIGIGGSDLGPKMVVHALHHVATPEISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR GCPEDALAKHFVGVSANPAEVVKFGIAADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFREAPL ERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFF QMLHQGPTIVPIDFIAVLTPEHPLAGHHPKLLANCFAQSEALMLGRTLEEARKVAGPGKEALAPHLTFPGNRPTTTLLVD ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEGDLSAESVDPAKHDSSTTALIERARAALKR >Mature_555_residues SRRGIPPDSRFTRTAMTLKSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTIPGGGLAADFSKNRIDDETLRL LVQLARDAGVEARRDAMFAGEIVNPTEGRAALHTALRATDPQAPFHAQVSAERAKMATFARAVRSGTWTGYTGKRIRHVI NIGIGGSDLGPKMVVHALHHVATPEISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVARG CPEDALAKHFVGVSANPAEVVKFGIAADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQFDELLAGANDMDRHFREAPLE RNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYLQQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQ MLHQGPTIVPIDFIAVLTPEHPLAGHHPKLLANCFAQSEALMLGRTLEEARKVAGPGKEALAPHLTFPGNRPTTTLLVDA LTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEGDLSAESVDPAKHDSSTTALIERARAALKR
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=541, Percent_Identity=48.9833641404806, Blast_Score=516, Evalue=1e-146, Organism=Homo sapiens, GI296080693, Length=557, Percent_Identity=44.7037701974865, Blast_Score=459, Evalue=1e-129, Organism=Escherichia coli, GI1790457, Length=542, Percent_Identity=49.2619926199262, Blast_Score=522, Evalue=1e-149, Organism=Caenorhabditis elegans, GI71996708, Length=556, Percent_Identity=48.3812949640288, Blast_Score=510, Evalue=1e-145, Organism=Caenorhabditis elegans, GI71996703, Length=552, Percent_Identity=48.3695652173913, Blast_Score=506, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6319673, Length=544, Percent_Identity=47.7941176470588, Blast_Score=510, Evalue=1e-145, Organism=Drosophila melanogaster, GI24651916, Length=553, Percent_Identity=48.6437613019892, Blast_Score=516, Evalue=1e-146, Organism=Drosophila melanogaster, GI24651914, Length=553, Percent_Identity=48.6437613019892, Blast_Score=516, Evalue=1e-146, Organism=Drosophila melanogaster, GI17737445, Length=553, Percent_Identity=48.6437613019892, Blast_Score=516, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 61089; Mature: 60958
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRGIPPDSRFTRTAMTLKSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTI CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC PGGGLAADFSKNRIDDETLRLLVQLARDAGVEARRDAMFAGEIVNPTEGRAALHTALRAT CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC DPQAPFHAQVSAERAKMATFARAVRSGTWTGYTGKRIRHVINIGIGGSDLGPKMVVHALH CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHH HVATPEISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR HHCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC GCPEDALAKHFVGVSANPAEVVKFGIAADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQ CCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHH FDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYL HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH QQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTP HHHHHCCCCCCEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECC EHPLAGHHPKLLANCFAQSEALMLGRTLEEARKVAGPGKEALAPHLTFPGNRPTTTLLVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEE ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEGDLSAESVDPAKHD CCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SSTTALIERARAALKR CHHHHHHHHHHHHHCC >Mature Secondary Structure SRRGIPPDSRFTRTAMTLKSLPAWTALQSHFEQIRHARLRDWFAPENDRAPTRAERFTI CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC PGGGLAADFSKNRIDDETLRLLVQLARDAGVEARRDAMFAGEIVNPTEGRAALHTALRAT CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC DPQAPFHAQVSAERAKMATFARAVRSGTWTGYTGKRIRHVINIGIGGSDLGPKMVVHALH CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHH HVATPEISTHFVSNVDGADLARVLEQVDPEETLAIIVSKTFTTLETMTNARSLRDWFVAR HHCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC GCPEDALAKHFVGVSANPAEVVKFGIAADNVFEMWDWVGGRYSLWSAVGLSIMIAIGPEQ CCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCEEEEEECHHH FDELLAGANDMDRHFREAPLERNLPVLLGLIGIWYRNFFGSQSYLVAPYSEALHYLPSYL HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH QQLEMESNGKSARLDGTFVDYPTSAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTP HHHHHCCCCCCEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECC EHPLAGHHPKLLANCFAQSEALMLGRTLEEARKVAGPGKEALAPHLTFPGNRPTTTLLVD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEE ALTPRTLGALIALYEHKVLVQATVWDINPFDQWGVELGKILGKVVEGDLSAESVDPAKHD CCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SSTTALIERARAALKR CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA