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The map label for this gene is tex [H]

Identifier: 116689819

GI number: 116689819

Start: 1996696

End: 1999020

Strand: Direct

Name: tex [H]

Synonym: Bcen2424_1798

Alternate gene names: 116689819

Gene position: 1996696-1999020 (Clockwise)

Preceding gene: 116689815

Following gene: 116689837

Centisome position: 57.31

GC content: 68.13

Gene sequence:

>2325_bases
ATGACGGAAACCGTAGCACTCAAGATCGTACAGCGCATCGCCACCGAACTGTCCGTCCAGCCGCGCCAGGTCGCGGCGGC
CGTGCAACTCCTCGACGAAGGCTCGACCGTTCCGTTCATTGCCCGGTACCGCAAGGAAGTGACCGGCAACCTGGACGACA
CGCAGCTGCGCAACCTCGAGGAACGCCTCCTGTATCTGCGCGAACTCGAGGATCGCCGCGCCGCGATCCTGTCGAGCATC
GACGAACAGGGCAAGCTGACCGACGAACTGCGTGCCGCGATCGACGCGGCCGACAGCAAACAGGTGCTCGAAGACCTTTA
TCTGCCGTACAAGCCGAAGCGCCGCACGCGCGCACAGATCGCCCGCGAAGCCGGCCTCGAGCCGCTCGCGCAGGCGCTGC
TCGCGAACCCGCTGCTCGACCCGCAGGCCGAGGCGGCCGCGTATGTCGACGCCGACAAGGGCGTCGCCGACGTGAAGGCC
GCGCTCGACGGCGCGCGCGACATCCTGTCCGAACAGTTCGGCGAGACGGCGGAACTGCTCGGCAAGCTGCGCGACTACCT
GCACAACCAGGGCGTCGTGTCGTCGGCCGTCGTCGAGGGCAAGGAAAACGAGGAAGGCGAGAAATTCCGCGACTATTACG
ACTACGCGGAAACGATCAAGACCGTGCCGTCGCACCGTGCGCTCGCGCTGTTCCGCGGCCGCAACGCCGGCGTGCTGACG
ATCAAGCTCGGCCTCGGCGAAGAGCTTGACGCGCAGGTGCCGCATCCCGGCGAGGCGATGATCGCGCGCCATTTCGGCAT
CGCGAACCAGAATCGCCCGGCCGACAAATGGCTGTCCGACGTCTGCCGCTGGTGCTGGCGCGTGAAGGTGCAGCCGCATA
TCGAGAACGAACTGCTCACGCAGCTGCGCGAAACGGCCGAAACCGAAGCGATCCGCGTGTTCGCGCGCAACCTGAACGAC
CTGCTGCTGGCCGCGCCGGCCGGCCCGAAGGCCGTGATCGGCCTCGACCCCGGCCTGCGTACGGGCGTGAAGGTCGCGGT
CGTCGACCGCACCGGCAAGGTGCTCGCGACCGACACGATCTACCCGCACGAGCCGCGCCGCGACTGGGACGGCTCGATCG
CGAAACTCGCGCGCATCGCCGCGCAGACGCAGGCCGAGCTGATCAGCATCGGCAACGGCACCGCATCGCGCGAAACCGAC
AAGCTCGCGAGCGAACTGATCGCGAAACACCCGGAGCTGCGCCTGCAGAAGATCGTCGTGTCGGAGGCCGGCGCGTCGGT
CTACTCGGCGTCCGAGCTCGCCGCGAAGGAATTCCCGGATCTCGACGTGTCGCTGCGCGGCGCCGTGTCGATCGCCCGCC
GCCTGCAGGACCCGCTCGCCGAGCTCGTGAAGATCGAGCCGAAGGCGATCGGCGTCGGCCAGTACCAGCACGACGTGAAC
CAGCGCGAACTCGCCCGCTCGCTCGACGCGGTCGTCGAGGATTGCGTGAACGCGGTCGGCGTCGACGCGAACACCGCGTC
GGCCCCGCTGCTCGCCCGCGTGTCGGGCCTGAACGCGACGCTCGCGCGCAACATCGTCGACTATCGCGATGCAAACGGCC
CGTTCCCGTCGCGCGAGCACCTGCGCAAGGTGCCGCGCCTCGGCGACAAAACTTTCGAACAGGCCGCCGGCTTCCTGCGC
ATCAACGGCGGCGAGAACCCGCTCGACCGCTCGTCGGTGCACCCGGAAGCGTATCCGGTCGTCGAGCGGATGCTCGCGAA
GATCAACAAGCGCATCGACGACGTGCTCGGCAACCGCGAAGCGCTGTCGGGCCTGTCGCCGACGGAATTTGTTGACGAAC
GTTTCGGCCTGCCGACCGTACGCGACATCCTCGCCGAACTGGAGAAACCGGGGCGCGATCCGCGTCCGGAATTCAAGACG
GCCACGTTCCGCGAAGGCGTCGAGAAGGTCTCGGACCTCGTGCCGGGCATGATGCTCGAAGGCGTCGTGACGAACGTCGC
GGCGTTCGGCGCGTTCGTGGATATCGGCGTGCACCAGGACGGCCTCGTCCACGTGTCGGCGATGTCGACGAAGTTCATCA
AGGACCCGCACGAAGTCGTGAAGGCCGGCCAGGTCGTCAAGGTGAAGGTGATCGACGTCGACGTGAAGCGCCAGCGCATC
GCGCTGACGATGCGCCTCGACGACGACGCGGCAGCGCCCGGCATGACGTCGCGCGGCGGCCAGGATCGCGGCAATGCGGG
GCGCGGCGCCGCCCGCCCGCAGCGTTCGCGCGAACCGGAGCCGGCCGGCGCGATGGCCGCGGCATTCGCGAAGCTGAAGC
GCTGA

Upstream 100 bases:

>100_bases
CACCCGCGGCCTCTGGCCCGTCGGGCCCGCCGGGCAGCCCGCCGCTTCGGGCCTGCCGGCCCGCGCCGCGATTTCAGCAG
GCAGACAGACCATCCACGAC

Downstream 100 bases:

>100_bases
GCACGCGAACAGCCGTCGACGTACAAAAAAGCCCGCCGAAAGGCGGGCTTTTTCATTATCTGGACAAACGCGGCGCGCGC
CGCGCTCGTCAGATCTCGAT

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRNLEERLLYLRELEDRRAAILSSI
DEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQAEAAAYVDADKGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLHNQGVVSSAVVEGKENEEGEKFRDYYDYAETIKTVPSHRALALFRGRNAGVLT
IKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLND
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTIYPHEPRRDWDGSIAKLARIAAQTQAELISIGNGTASRETD
KLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLR
INGGENPLDRSSVHPEAYPVVERMLAKINKRIDDVLGNREALSGLSPTEFVDERFGLPTVRDILAELEKPGRDPRPEFKT
ATFREGVEKVSDLVPGMMLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQVVKVKVIDVDVKRQRI
ALTMRLDDDAAAPGMTSRGGQDRGNAGRGAARPQRSREPEPAGAMAAAFAKLKR

Sequences:

>Translated_774_residues
MTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRNLEERLLYLRELEDRRAAILSSI
DEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQAEAAAYVDADKGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLHNQGVVSSAVVEGKENEEGEKFRDYYDYAETIKTVPSHRALALFRGRNAGVLT
IKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLND
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTIYPHEPRRDWDGSIAKLARIAAQTQAELISIGNGTASRETD
KLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLR
INGGENPLDRSSVHPEAYPVVERMLAKINKRIDDVLGNREALSGLSPTEFVDERFGLPTVRDILAELEKPGRDPRPEFKT
ATFREGVEKVSDLVPGMMLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQVVKVKVIDVDVKRQRI
ALTMRLDDDAAAPGMTSRGGQDRGNAGRGAARPQRSREPEPAGAMAAAFAKLKR
>Mature_773_residues
TETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRNLEERLLYLRELEDRRAAILSSID
EQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQAEAAAYVDADKGVADVKAA
LDGARDILSEQFGETAELLGKLRDYLHNQGVVSSAVVEGKENEEGEKFRDYYDYAETIKTVPSHRALALFRGRNAGVLTI
KLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLNDL
LLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTIYPHEPRRDWDGSIAKLARIAAQTQAELISIGNGTASRETDK
LASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQ
RELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLRI
NGGENPLDRSSVHPEAYPVVERMLAKINKRIDDVLGNREALSGLSPTEFVDERFGLPTVRDILAELEKPGRDPRPEFKTA
TFREGVEKVSDLVPGMMLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQVVKVKVIDVDVKRQRIA
LTMRLDDDAAAPGMTSRGGQDRGNAGRGAARPQRSREPEPAGAMAAAFAKLKR

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=793, Percent_Identity=33.6696090794451, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI27597090, Length=402, Percent_Identity=24.8756218905473, Blast_Score=86, Evalue=2e-16,
Organism=Escherichia coli, GI87082262, Length=753, Percent_Identity=64.2762284196547, Blast_Score=944, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=39.4736842105263, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17511129, Length=718, Percent_Identity=30.5013927576602, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17552892, Length=260, Percent_Identity=27.6923076923077, Blast_Score=66, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6321552, Length=217, Percent_Identity=26.2672811059908, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI62484314, Length=752, Percent_Identity=31.5159574468085, Blast_Score=366, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 84535; Mature: 84404

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRNLE
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
ERLLYLRELEDRRAAILSSIDEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AREAGLEPLAQALLANPLLDPQAEAAAYVDADKGVADVKAALDGARDILSEQFGETAELL
HHHHCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
GKLRDYLHNQGVVSSAVVEGKENEEGEKFRDYYDYAETIKTVPSHRALALFRGRNAGVLT
HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE
IKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLT
EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
QLRETAETEAIRVFARNLNDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTI
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCC
YPHEPRRDWDGSIAKLARIAAQTQAELISIGNGTASRETDKLASELIAKHPELRLQKIVV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
SEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
HHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
QRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH
LRKVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERMLAKINKRIDDVLGNRE
HHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
ALSGLSPTEFVDERFGLPTVRDILAELEKPGRDPRPEFKTATFREGVEKVSDLVPGMMLE
HHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
GVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQVVKVKVIDVDVKRQRI
HHHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHCCHHHHHHCCCEEEEEEEEECCCCEEE
ALTMRLDDDAAAPGMTSRGGQDRGNAGRGAARPQRSREPEPAGAMAAAFAKLKR
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRNLE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
ERLLYLRELEDRRAAILSSIDEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AREAGLEPLAQALLANPLLDPQAEAAAYVDADKGVADVKAALDGARDILSEQFGETAELL
HHHHCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
GKLRDYLHNQGVVSSAVVEGKENEEGEKFRDYYDYAETIKTVPSHRALALFRGRNAGVLT
HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE
IKLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLT
EEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
QLRETAETEAIRVFARNLNDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTI
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCC
YPHEPRRDWDGSIAKLARIAAQTQAELISIGNGTASRETDKLASELIAKHPELRLQKIVV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
SEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
HHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
QRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHH
LRKVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERMLAKINKRIDDVLGNRE
HHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
ALSGLSPTEFVDERFGLPTVRDILAELEKPGRDPRPEFKTATFREGVEKVSDLVPGMMLE
HHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
GVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQVVKVKVIDVDVKRQRI
HHHHHHHHHHHHHEECCCCCCCEEEEHHHHHHHCCHHHHHHCCCEEEEEEEEECCCCEEE
ALTMRLDDDAAAPGMTSRGGQDRGNAGRGAARPQRSREPEPAGAMAAAFAKLKR
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]