Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689808

Identifier: 116689808

GI number: 116689808

Start: 1983821

End: 1984663

Strand: Reverse

Name: 116689808

Synonym: Bcen2424_1787

Alternate gene names: NA

Gene position: 1984663-1983821 (Counterclockwise)

Preceding gene: 116689809

Following gene: 116689807

Centisome position: 56.97

GC content: 68.21

Gene sequence:

>843_bases
ATGCGAGGGATTCGAACGGCATCGACCGGCAGGCTGGCCGGTCTTGCTGCGATGTTCATGATGGGTGTCGGCGTGGCCTT
GCCGAGCTTTGCGATGGATTGCGCGAAAGCCGTCCAGCCGATCGAGAAGCGCATTTGCGCGAGCCCCGCGCTGCGCGCGG
CCGATGCGCGGTTGAATGCGGCCTATGCGGGCGCGCTGAAGGCCGCGCCGGACGCCGCCATCCGCGACATGCTGGTGCGT
AGCCAGCGCCGCTGGCTCGATGCGCGCAACAAGCGCCTCGATACCGATTACGAAGGCCATCGGCTGGCCGTCGACGAAGT
GCGCAAGGCCTTCGATCGGCGTGCCGCCGTGCTGGCCGACCGATCGGGCGAAGGGCTGATCGCGCGAGCTCTGGCTGAAC
GGCAGTGGCTCGCGAAATACAGCGGCGGCCCGCTGGCCGGCTTCGATGCAAACTGCGATTTCATCCCCGACGATGCGAGT
GGCGCGCATGTTTCCTATGCGTGTTTCGGCGCGATTCACGTGCAGCATCATGCGCGGGTGTGCAGCCAGAGCGAGGACTG
GGCGACCGGCGCGGTCTACCAGTATCGTCTGGTGAGCGCGGCCGATGGCGGGAAGGTGCATCCGGTGGCGTTCTGCGAAG
CGCAAGGCGCGCATGCATGCGACAGCGGCAGCGCGCAGGCGGGATGGGTGGGTGCCGCGACGCCCGGCGGCGAGAGCCGT
ACACCCGCGCCGGTGACGGGCCTGCCGCAGCTCGATGCCGAATTGTGGCCGCTCGGCGATGGCGGCGATGCGGCGTGGTT
CGATCGGTGTCTGACGGCGCCGGTGTTTCCGGATGTGCACTGA

Upstream 100 bases:

>100_bases
CGCTTTTGGCGAACGCCGGGGCGGTTCCGGCGCACGGCGATAGGTGCGATACCGCGTCGATGCGGGGCGGCCGAGAAAAA
CAAACCGACTGAGAGAAAGC

Downstream 100 bases:

>100_bases
CGCGCGGCGTTGGGGGTTCGAGCAAGGCCCGCGATGACTGGCGTTTTGTTTTACCGGCCGCGGAATCGAGCGTCGCCAAT
GTCGGGCAATCGTTTGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRGIRTASTGRLAGLAAMFMMGVGVALPSFAMDCAKAVQPIEKRICASPALRAADARLNAAYAGALKAAPDAAIRDMLVR
SQRRWLDARNKRLDTDYEGHRLAVDEVRKAFDRRAAVLADRSGEGLIARALAERQWLAKYSGGPLAGFDANCDFIPDDAS
GAHVSYACFGAIHVQHHARVCSQSEDWATGAVYQYRLVSAADGGKVHPVAFCEAQGAHACDSGSAQAGWVGAATPGGESR
TPAPVTGLPQLDAELWPLGDGGDAAWFDRCLTAPVFPDVH

Sequences:

>Translated_280_residues
MRGIRTASTGRLAGLAAMFMMGVGVALPSFAMDCAKAVQPIEKRICASPALRAADARLNAAYAGALKAAPDAAIRDMLVR
SQRRWLDARNKRLDTDYEGHRLAVDEVRKAFDRRAAVLADRSGEGLIARALAERQWLAKYSGGPLAGFDANCDFIPDDAS
GAHVSYACFGAIHVQHHARVCSQSEDWATGAVYQYRLVSAADGGKVHPVAFCEAQGAHACDSGSAQAGWVGAATPGGESR
TPAPVTGLPQLDAELWPLGDGGDAAWFDRCLTAPVFPDVH
>Mature_280_residues
MRGIRTASTGRLAGLAAMFMMGVGVALPSFAMDCAKAVQPIEKRICASPALRAADARLNAAYAGALKAAPDAAIRDMLVR
SQRRWLDARNKRLDTDYEGHRLAVDEVRKAFDRRAAVLADRSGEGLIARALAERQWLAKYSGGPLAGFDANCDFIPDDAS
GAHVSYACFGAIHVQHHARVCSQSEDWATGAVYQYRLVSAADGGKVHPVAFCEAQGAHACDSGSAQAGWVGAATPGGESR
TPAPVTGLPQLDAELWPLGDGGDAAWFDRCLTAPVFPDVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29618; Mature: 29618

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIRTASTGRLAGLAAMFMMGVGVALPSFAMDCAKAVQPIEKRICASPALRAADARLNA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AYAGALKAAPDAAIRDMLVRSQRRWLDARNKRLDTDYEGHRLAVDEVRKAFDRRAAVLAD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHCC
RSGEGLIARALAERQWLAKYSGGPLAGFDANCDFIPDDASGAHVSYACFGAIHVQHHARV
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH
CSQSEDWATGAVYQYRLVSAADGGKVHPVAFCEAQGAHACDSGSAQAGWVGAATPGGESR
HCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
TPAPVTGLPQLDAELWPLGDGGDAAWFDRCLTAPVFPDVH
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRGIRTASTGRLAGLAAMFMMGVGVALPSFAMDCAKAVQPIEKRICASPALRAADARLNA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AYAGALKAAPDAAIRDMLVRSQRRWLDARNKRLDTDYEGHRLAVDEVRKAFDRRAAVLAD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHCC
RSGEGLIARALAERQWLAKYSGGPLAGFDANCDFIPDDASGAHVSYACFGAIHVQHHARV
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH
CSQSEDWATGAVYQYRLVSAADGGKVHPVAFCEAQGAHACDSGSAQAGWVGAATPGGESR
HCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
TPAPVTGLPQLDAELWPLGDGGDAAWFDRCLTAPVFPDVH
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA