Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689801
Identifier: 116689801
GI number: 116689801
Start: 1978381
End: 1978923
Strand: Reverse
Name: 116689801
Synonym: Bcen2424_1780
Alternate gene names: NA
Gene position: 1978923-1978381 (Counterclockwise)
Preceding gene: 116689802
Following gene: 116689800
Centisome position: 56.8
GC content: 69.8
Gene sequence:
>543_bases GTGGGTCGATATTCGGAATGGCAACGGGCGCTCGTCGTCGCCGGTGCGCTGGTGGCGGGCATCGCGATGCCGGGGTTGGG CGCCGCGCAGGCGGTCGTGCCGGGTGTGCAGCAGGATGAACCGGCGCCGGCGCGGCCGCTGAAGCCGAATCCCGAGTTCG CCCGCCTGCCGCGCTACGAAGGCACGCTCGGCGACCGGCCGATCGTCGTGCATCTCGGCCCGAAGACGGACGAGGAAGGC GTGCACGGCGAATACCAGTTCGCCGATACGGGCGAGGTGGTGCTGCTCGCGGGCGACCGCGACGGCGATACGCTGGAAAT CGAGGAGTCGAACGACGGCACGAACATCACCGGCGTATGGATCGGCCGCTTCGACGCGACGGGCGACCTGAAGGCCGACC GGATGAACTCGGACGAATCGGACCCGCAGCCGGTCGTGCTGCACCTGGCGCCTGGCAAGCGCGCGGCGTTGCAAGTGCGC GACGGCCACGTGCGCGAAATCGAGACGGTGGGCGGCGTCGTCAACCTGCATCCCGACGACTGA
Upstream 100 bases:
>100_bases GCGCCTTCGCCGCGCACGCTTGCGCGGTCAGCAGGAACCGGGTCTCGACCCGGCACGGTCCGCGATTGCCGGGCGAATCT GAAGCAAGGAGCAACACAAG
Downstream 100 bases:
>100_bases GCGCGTGCTGGCTCGGTGTGCGCGGCGCGCATTGTATCGGGCCAACCGCGCCGATTTTGGCTACTCTAACGACATATTCC GCAACCGAACGGCCTCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGRYSEWQRALVVAGALVAGIAMPGLGAAQAVVPGVQQDEPAPARPLKPNPEFARLPRYEGTLGDRPIVVHLGPKTDEEG VHGEYQFADTGEVVLLAGDRDGDTLEIEESNDGTNITGVWIGRFDATGDLKADRMNSDESDPQPVVLHLAPGKRAALQVR DGHVREIETVGGVVNLHPDD
Sequences:
>Translated_180_residues MGRYSEWQRALVVAGALVAGIAMPGLGAAQAVVPGVQQDEPAPARPLKPNPEFARLPRYEGTLGDRPIVVHLGPKTDEEG VHGEYQFADTGEVVLLAGDRDGDTLEIEESNDGTNITGVWIGRFDATGDLKADRMNSDESDPQPVVLHLAPGKRAALQVR DGHVREIETVGGVVNLHPDD >Mature_179_residues GRYSEWQRALVVAGALVAGIAMPGLGAAQAVVPGVQQDEPAPARPLKPNPEFARLPRYEGTLGDRPIVVHLGPKTDEEGV HGEYQFADTGEVVLLAGDRDGDTLEIEESNDGTNITGVWIGRFDATGDLKADRMNSDESDPQPVVLHLAPGKRAALQVRD GHVREIETVGGVVNLHPDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19216; Mature: 19084
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYSEWQRALVVAGALVAGIAMPGLGAAQAVVPGVQQDEPAPARPLKPNPEFARLPRYE CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC GTLGDRPIVVHLGPKTDEEGVHGEYQFADTGEVVLLAGDRDGDTLEIEESNDGTNITGVW CCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCCEEEEEE IGRFDATGDLKADRMNSDESDPQPVVLHLAPGKRAALQVRDGHVREIETVGGVVNLHPDD EEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCC >Mature Secondary Structure GRYSEWQRALVVAGALVAGIAMPGLGAAQAVVPGVQQDEPAPARPLKPNPEFARLPRYE CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC GTLGDRPIVVHLGPKTDEEGVHGEYQFADTGEVVLLAGDRDGDTLEIEESNDGTNITGVW CCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCCEEEEEE IGRFDATGDLKADRMNSDESDPQPVVLHLAPGKRAALQVRDGHVREIETVGGVVNLHPDD EEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA