| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pstB1 [H]
Identifier: 116689794
GI number: 116689794
Start: 1971408
End: 1972109
Strand: Direct
Name: pstB1 [H]
Synonym: Bcen2424_1773
Alternate gene names: 116689794
Gene position: 1971408-1972109 (Clockwise)
Preceding gene: 116689792
Following gene: 116689795
Centisome position: 56.59
GC content: 71.23
Gene sequence:
>702_bases ATGACCTCCCCCACCGGCCTCATCGACGCGCAGCACATCACGCGGCGCGACGCCAGCAGCGGCAAGACGCTGCTCGCCCC GACCGATTTCAGCCTCGCCGCGGGATCGCGAATTGCTATCACCGGGCCATCCGGGTCGGGCAAGAGCGTGCTGCTGCGCG CGCTCGCGCTGCTCGATCCGCTCGACGGCGGTCACATCCTGTGGCGCGGCCGGCGGATCCGGCGCAGCGCGATTCCGCGC TATCGGCGCAGCATCGCCTATGTCCGCCAGCGCCCCGCGCAGATGGACGGCACCGTCGAAGCGCAGTTGCGCTACCCGTA TTCGCTCGCGATCTATCGCGACGTCGCGTTCGACCGCGCCCGCGCCGAAGCGCTCGCCGCGCAGGCCGGCCGCGGCGCCG GTTTTCTCGACAAGCGCGCGAGCGACCTGTCCGGCGGCGAAGCGCAGATCACCGCGCTGCTGCGCGTGCTGCAACTCGAT CCCGACGTCCTACTGCTCGACGAGCCGACCTCCGCCCTTGATCCCGAATCGGCGCGCGCGATCGAAGCGCTCGTCGGTGC GTGGTTCGACGCGGCGCCCGATGCGCGCGCCTACATGTGGATCTCGCACGATCCGGCCCAGGCCGCGCGAATCGCCACGA TGCGGCTCGTGATGCAGGCCGGCGTCCTGCACGCGGCCAACCCGACGGAGGCTGCGCAATGA
Upstream 100 bases:
>100_bases GTGGACGAACGGCGCACGACAACTGCGGCTTTTCAATCGGTATTATGGCGCACGACATGGCGGCCTTTCGGCGCCATTAA CGCTTTTTTTCACTTTTGAC
Downstream 100 bases:
>100_bases GCCCGGCACTGCAGGACCTGAGCCTCGTCGACGTCGGCATCGCCGCCGCGCTCGTCGCCGTCAACGGTGCGATCTCGGCG GCGCTGTCGCTCGGCCTCGG
Product: ABC transporter related
Products: NA
Alternate protein names: ABC phosphate transporter 1; Phosphate-transporting ATPase 1 [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTSPTGLIDAQHITRRDASSGKTLLAPTDFSLAAGSRIAITGPSGSGKSVLLRALALLDPLDGGHILWRGRRIRRSAIPR YRRSIAYVRQRPAQMDGTVEAQLRYPYSLAIYRDVAFDRARAEALAAQAGRGAGFLDKRASDLSGGEAQITALLRVLQLD PDVLLLDEPTSALDPESARAIEALVGAWFDAAPDARAYMWISHDPAQAARIATMRLVMQAGVLHAANPTEAAQ
Sequences:
>Translated_233_residues MTSPTGLIDAQHITRRDASSGKTLLAPTDFSLAAGSRIAITGPSGSGKSVLLRALALLDPLDGGHILWRGRRIRRSAIPR YRRSIAYVRQRPAQMDGTVEAQLRYPYSLAIYRDVAFDRARAEALAAQAGRGAGFLDKRASDLSGGEAQITALLRVLQLD PDVLLLDEPTSALDPESARAIEALVGAWFDAAPDARAYMWISHDPAQAARIATMRLVMQAGVLHAANPTEAAQ >Mature_232_residues TSPTGLIDAQHITRRDASSGKTLLAPTDFSLAAGSRIAITGPSGSGKSVLLRALALLDPLDGGHILWRGRRIRRSAIPRY RRSIAYVRQRPAQMDGTVEAQLRYPYSLAIYRDVAFDRARAEALAAQAGRGAGFLDKRASDLSGGEAQITALLRVLQLDP DVLLLDEPTSALDPESARAIEALVGAWFDAAPDARAYMWISHDPAQAARIATMRLVMQAGVLHAANPTEAAQ
Specific function: Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system [H]
COG id: COG4619
COG function: function code R; ABC-type uncharacterized transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955968, Length=184, Percent_Identity=32.0652173913043, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI9955966, Length=184, Percent_Identity=32.0652173913043, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI45243524, Length=184, Percent_Identity=32.0652173913043, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI255708477, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI9961250, Length=195, Percent_Identity=31.2820512820513, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4505771, Length=195, Percent_Identity=31.2820512820513, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI42741659, Length=176, Percent_Identity=31.8181818181818, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI9961252, Length=195, Percent_Identity=31.2820512820513, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI42490749, Length=193, Percent_Identity=30.0518134715026, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI171184400, Length=221, Percent_Identity=32.579185520362, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI9955963, Length=173, Percent_Identity=31.7919075144509, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI21536378, Length=206, Percent_Identity=28.1553398058252, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9665248, Length=160, Percent_Identity=31.25, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1786698, Length=195, Percent_Identity=32.8205128205128, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=28.1938325991189, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788225, Length=242, Percent_Identity=28.9256198347107, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786872, Length=194, Percent_Identity=29.8969072164948, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=28.3185840707965, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789962, Length=203, Percent_Identity=31.5270935960591, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=27.1551724137931, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1787143, Length=190, Percent_Identity=31.0526315789474, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=30.0970873786408, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1786345, Length=159, Percent_Identity=35.8490566037736, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1790162, Length=221, Percent_Identity=29.8642533936652, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787089, Length=199, Percent_Identity=31.1557788944724, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786398, Length=185, Percent_Identity=32.972972972973, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=29.0322580645161, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790544, Length=172, Percent_Identity=33.7209302325581, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786253, Length=203, Percent_Identity=30.5418719211823, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787370, Length=216, Percent_Identity=25.462962962963, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788450, Length=231, Percent_Identity=29.004329004329, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=28.169014084507, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI87082267, Length=213, Percent_Identity=29.5774647887324, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1787792, Length=218, Percent_Identity=28.8990825688073, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI145693107, Length=215, Percent_Identity=32.093023255814, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789032, Length=216, Percent_Identity=33.7962962962963, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786703, Length=226, Percent_Identity=29.646017699115, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786975, Length=233, Percent_Identity=31.3304721030043, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=26.431718061674, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787500, Length=201, Percent_Identity=27.363184079602, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787758, Length=193, Percent_Identity=31.0880829015544, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI2367384, Length=198, Percent_Identity=30.3030303030303, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1789873, Length=231, Percent_Identity=27.7056277056277, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI87081782, Length=245, Percent_Identity=25.7142857142857, Blast_Score=61, Evalue=8e-11, Organism=Escherichia coli, GI1790739, Length=213, Percent_Identity=28.169014084507, Blast_Score=60, Evalue=1e-10, Organism=Caenorhabditis elegans, GI193211015, Length=216, Percent_Identity=32.4074074074074, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71996809, Length=216, Percent_Identity=32.4074074074074, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI193211017, Length=216, Percent_Identity=32.4074074074074, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17567265, Length=183, Percent_Identity=33.879781420765, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI193202349, Length=213, Percent_Identity=32.3943661971831, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17565938, Length=220, Percent_Identity=30.9090909090909, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115535101, Length=178, Percent_Identity=35.9550561797753, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI212646699, Length=206, Percent_Identity=30.5825242718447, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI25146777, Length=206, Percent_Identity=30.0970873786408, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17567269, Length=205, Percent_Identity=33.1707317073171, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17558664, Length=197, Percent_Identity=32.994923857868, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17541710, Length=186, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71992285, Length=185, Percent_Identity=30.8108108108108, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17543740, Length=215, Percent_Identity=27.906976744186, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193209708, Length=218, Percent_Identity=30.2752293577982, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17533971, Length=210, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17569143, Length=208, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115533592, Length=200, Percent_Identity=30, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17569145, Length=208, Percent_Identity=30.2884615384615, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71992290, Length=186, Percent_Identity=29.5698924731183, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984940, Length=241, Percent_Identity=25.7261410788382, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17569081, Length=159, Percent_Identity=30.8176100628931, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=159, Percent_Identity=34.5911949685535, Blast_Score=79, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323959, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322980, Length=218, Percent_Identity=29.8165137614679, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322640, Length=201, Percent_Identity=27.8606965174129, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324985, Length=164, Percent_Identity=34.1463414634146, Blast_Score=66, Evalue=4e-12, Organism=Drosophila melanogaster, GI21357907, Length=172, Percent_Identity=34.3023255813954, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24659289, Length=175, Percent_Identity=34.8571428571429, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17136662, Length=181, Percent_Identity=33.1491712707182, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85726357, Length=185, Percent_Identity=29.1891891891892, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=28.8288288288288, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=28.8288288288288, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015850 - InterPro: IPR003593 - InterPro: IPR005670 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.27 [H]
Molecular weight: Translated: 25036; Mature: 24905
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPTGLIDAQHITRRDASSGKTLLAPTDFSLAAGSRIAITGPSGSGKSVLLRALALLDP CCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC LDGGHILWRGRRIRRSAIPRYRRSIAYVRQRPAQMDGTVEAQLRYPYSLAIYRDVAFDRA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEHHHHHHHHH RAEALAAQAGRGAGFLDKRASDLSGGEAQITALLRVLQLDPDVLLLDEPTSALDPESARA HHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH IEALVGAWFDAAPDARAYMWISHDPAQAARIATMRLVMQAGVLHAANPTEAAQ HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEECCCCCCCCC >Mature Secondary Structure TSPTGLIDAQHITRRDASSGKTLLAPTDFSLAAGSRIAITGPSGSGKSVLLRALALLDP CCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC LDGGHILWRGRRIRRSAIPRYRRSIAYVRQRPAQMDGTVEAQLRYPYSLAIYRDVAFDRA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEHHHHHHHHH RAEALAAQAGRGAGFLDKRASDLSGGEAQITALLRVLQLDPDVLLLDEPTSALDPESARA HHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH IEALVGAWFDAAPDARAYMWISHDPAQAARIATMRLVMQAGVLHAANPTEAAQ HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]