Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yhjG [H]

Identifier: 116689793

GI number: 116689793

Start: 1968958

End: 1971255

Strand: Reverse

Name: yhjG [H]

Synonym: Bcen2424_1772

Alternate gene names: 116689793

Gene position: 1971255-1968958 (Counterclockwise)

Preceding gene: 116689796

Following gene: 116689791

Centisome position: 56.58

GC content: 67.58

Gene sequence:

>2298_bases
ATGACGCTAACCCGAGCCATCGGCAAATCGGCTGCATGGATCGTCGGTATCGTCGCGGTGCTCATCGCGGCGGCCGGCAT
CTTTATCTTCACGTTCGACTGGAACCGCGCGAAACCGTGGGTCAACGAACAGGTGAGTACCGCGCTCGGCCGCCCGTTCG
CGATCAACGGCGATCTCAAGGTCGGCTGGCGTCGTCCCGATGGCGAGACCGGCTGGCGTGCATGGGTGCCCTGGCCGAGC
TTCTCCGCCACGCAACTCGAGATCGGCAATCCCGACTGGGCGCAGGCGCCCAAGTTCGTCACGCTCGATGCCGCGCACTT
CGATCTCGCGCTCCTGCCGCTGCTGGCGCATGAAATCGTCATCCCGTCGATCGACGTCGTGAATCCTGCCGTCGATCTCG
AACGGCGCGCGGACGGCAGCAATACGTGGACCTTCCAGTTCAAGCAATCGTCGCAGCCTTCGCGGTGGAAGGTGCGGCTC
GACAGCTTCGGTTTCGCGAAGGGCACCGTCACGTATCGCGATGCGATCACGAAGGCCGACCTGACCGTCGCGATCGATAC
GCTCGGGCAGCCGATTCCGCTCGGCGACGTGCTGAAGGAGCAGGAGCAGACCTCGCGTGCGGCGTCGGCGCAGCGCGTCG
GCAAGCATGGCGCCGCGCAACTGGGCGCGAAGGCCGATGCGCAAGCCGCGTCGGGCGAGTCGGGGGCGAGTGCGGTCGCG
GCCTCGGGTGCGTCGGCTGCGAGCGGCGTTGCTTCGGCTGCGTCAGGTTCGTCCGGTTCATCCGCTTCGTCCGCGCCTTC
CGCGTCGGCGGCCGCTGCCGCGTCCGGCGCGAGCGGCGCCGCGGCGCCCGCGAAGCCGTCCGGCCCCACCTACGCGTTCG
GGCTGAAGGTCGACGGCCGCTACAAGAACGTGCCGATCAGCGGCACCGGCAAGGTCGGCGGCGTGCTCGCGATCCAGGAT
ACGTCGCAGCCGTTCCCGCTGCAGGCCGACGTGAAGGCGGGCGATACGCGGCTCGCGATTGTCGGCACGCTGACCGATCC
GAGGCATCTCGCGGCGCTCGACCTGCGGCTGTGGCTGCAGGGCACGTCGATGTCGCACCTTTACCAGCTCACCGGCATCA
CGCTGCCCGATACGCCGCCTTACGCGACCGAAGGGCGCTTGATCGGCAACTTCAAGCCGAATGCGAGCACCTTCCGCTAC
GAGAACTTCAACGGTCGCGTCGGCGGCAGCGATCTCGGCGGCACGCTCACCTGGGCGCAGCGCGAGCCGCGGCCGAAGCT
GTCGGGCGAACTCGTGTCGAACCTGCTGCAGTTCTCCGATCTCGCGCCGGTGATCGGCGCCGACTCGGCCGCGAGCAAGA
AGAAGCGCGGCGACACGACGCGCCAGCCGCCCGACCGCGTGCTGCCGGTCGCGGCGTTCCGCACCGAACGGTGGAGCGCG
ATCGATGCAGACGTGAAGTTCACCGGCCGCAAGCTGATCAAGAGCGCGGACCTGCCGATCACCAACCTGTACACGCACAT
TCTGATGCAGGACGGCGTGCTGACGCTGGAGCCGCTGCAGTTCGGCGTCGCGGGCGGCACGCTCGCGACGAATGCGCATC
TCGACGGCAGCCGCACGCCGCTCAAGGGCCGCTTCACGCTGGCCGCGCGGCATCTGAAGCTCAAGCAGCTGTTCCCGACG
CAGAAGGTGATGCAGTCGGCGTTCGGCGAAATCAACGGCGACGCGTCGCTGTCGGCAACGGGCAATTCGCCGGCCGCGCT
CGCGGCGACGTCGACCGGCGAAGTGAAGGCGCTCATCACCAACGGTCGCATCAGCCGCCTGCTGATGGAGGCCGCGGGGT
TGAACGTCGCGAACGTCGTCTACGAGAAACTGTTCGGCAACCGCGACGTCAACATCAATTGCGCGGCGATCGATTTCGTC
GCGACCGACGGCATGCTCGACCCGAAGGTCTTCGCGCTCGATACCGACGACGCGCTCATCAACGTCGACGGCCCGATCAA
CCTGCGCGACGAATCGCTCGACCTGAAGATCCATCCGCACACGAAGGGCTTCCGGATCTTCTCGCTGCGCTCGCCGTTGT
ATGCGAAGGGCACGTTCAAGAACCCGAAGGTCGGCGTCGATGCGGGCGCGCTCGCGCTGCGCGCCGGCGCGATGGTCGGG
CTCGGGCTGATCAACCCGTTCGCGGCGCTGATCCCGCTGATCGCGCCGAGCAACAACCGCGACGTGCCGTGCTCGGAACT
GTTCGGGCAGATGAAGGCGCAGGCGGCGCAGAAAGCGGCCAAGAAGGCCGGCAAGTGA

Upstream 100 bases:

>100_bases
CCATAATACCGATTGAAAAGCCGCAGTTGTCGTGCGCCGTTCGTCCACGCAAGCGGCCCGGCATGGCGCGGCAACGCTTC
AGAACAACAACGGAACCGCC

Downstream 100 bases:

>100_bases
TGCGCGCAGCCGTCGGAGCGGCTTGTGCCGCGGTGCGGCGGCTCGGCATCGTTGCCGCGACCGGCTGAGCGCTGGCCGTG
CGGCGCCGCCGAGGTGCTCA

Product: AsmA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 764

Protein sequence:

>765_residues
MTLTRAIGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRPDGETGWRAWVPWPS
FSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDVVNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRL
DSFGFAKGTVTYRDAITKADLTVAIDTLGQPIPLGDVLKEQEQTSRAASAQRVGKHGAAQLGAKADAQAASGESGASAVA
ASGASAASGVASAASGSSGSSASSAPSASAAAAASGASGAAAPAKPSGPTYAFGLKVDGRYKNVPISGTGKVGGVLAIQD
TSQPFPLQADVKAGDTRLAIVGTLTDPRHLAALDLRLWLQGTSMSHLYQLTGITLPDTPPYATEGRLIGNFKPNASTFRY
ENFNGRVGGSDLGGTLTWAQREPRPKLSGELVSNLLQFSDLAPVIGADSAASKKKRGDTTRQPPDRVLPVAAFRTERWSA
IDADVKFTGRKLIKSADLPITNLYTHILMQDGVLTLEPLQFGVAGGTLATNAHLDGSRTPLKGRFTLAARHLKLKQLFPT
QKVMQSAFGEINGDASLSATGNSPAALAATSTGEVKALITNGRISRLLMEAAGLNVANVVYEKLFGNRDVNINCAAIDFV
ATDGMLDPKVFALDTDDALINVDGPINLRDESLDLKIHPHTKGFRIFSLRSPLYAKGTFKNPKVGVDAGALALRAGAMVG
LGLINPFAALIPLIAPSNNRDVPCSELFGQMKAQAAQKAAKKAGK

Sequences:

>Translated_765_residues
MTLTRAIGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRPDGETGWRAWVPWPS
FSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDVVNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRL
DSFGFAKGTVTYRDAITKADLTVAIDTLGQPIPLGDVLKEQEQTSRAASAQRVGKHGAAQLGAKADAQAASGESGASAVA
ASGASAASGVASAASGSSGSSASSAPSASAAAAASGASGAAAPAKPSGPTYAFGLKVDGRYKNVPISGTGKVGGVLAIQD
TSQPFPLQADVKAGDTRLAIVGTLTDPRHLAALDLRLWLQGTSMSHLYQLTGITLPDTPPYATEGRLIGNFKPNASTFRY
ENFNGRVGGSDLGGTLTWAQREPRPKLSGELVSNLLQFSDLAPVIGADSAASKKKRGDTTRQPPDRVLPVAAFRTERWSA
IDADVKFTGRKLIKSADLPITNLYTHILMQDGVLTLEPLQFGVAGGTLATNAHLDGSRTPLKGRFTLAARHLKLKQLFPT
QKVMQSAFGEINGDASLSATGNSPAALAATSTGEVKALITNGRISRLLMEAAGLNVANVVYEKLFGNRDVNINCAAIDFV
ATDGMLDPKVFALDTDDALINVDGPINLRDESLDLKIHPHTKGFRIFSLRSPLYAKGTFKNPKVGVDAGALALRAGAMVG
LGLINPFAALIPLIAPSNNRDVPCSELFGQMKAQAAQKAAKKAGK
>Mature_764_residues
TLTRAIGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLKVGWRRPDGETGWRAWVPWPSF
SATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIVIPSIDVVNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLD
SFGFAKGTVTYRDAITKADLTVAIDTLGQPIPLGDVLKEQEQTSRAASAQRVGKHGAAQLGAKADAQAASGESGASAVAA
SGASAASGVASAASGSSGSSASSAPSASAAAAASGASGAAAPAKPSGPTYAFGLKVDGRYKNVPISGTGKVGGVLAIQDT
SQPFPLQADVKAGDTRLAIVGTLTDPRHLAALDLRLWLQGTSMSHLYQLTGITLPDTPPYATEGRLIGNFKPNASTFRYE
NFNGRVGGSDLGGTLTWAQREPRPKLSGELVSNLLQFSDLAPVIGADSAASKKKRGDTTRQPPDRVLPVAAFRTERWSAI
DADVKFTGRKLIKSADLPITNLYTHILMQDGVLTLEPLQFGVAGGTLATNAHLDGSRTPLKGRFTLAARHLKLKQLFPTQ
KVMQSAFGEINGDASLSATGNSPAALAATSTGEVKALITNGRISRLLMEAAGLNVANVVYEKLFGNRDVNINCAAIDFVA
TDGMLDPKVFALDTDDALINVDGPINLRDESLDLKIHPHTKGFRIFSLRSPLYAKGTFKNPKVGVDAGALALRAGAMVGL
GLINPFAALIPLIAPSNNRDVPCSELFGQMKAQAAQKAAKKAGK

Specific function: Unknown

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510981, Length=490, Percent_Identity=45.7142857142857, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 80434; Mature: 80303

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTRAIGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLK
CCCHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHCCCCEEECCCEE
VGWRRPDGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIV
EEEECCCCCCCCEEEECCCCCCCEEEECCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHH
IPSIDVVNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDAITKAD
CCCCHHCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEHHHHHCCCC
LTVAIDTLGQPIPLGDVLKEQEQTSRAASAQRVGKHGAAQLGAKADAQAASGESGASAVA
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHH
ASGASAASGVASAASGSSGSSASSAPSASAAAAASGASGAAAPAKPSGPTYAFGLKVDGR
CCCCCHHHCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCE
YKNVPISGTGKVGGVLAIQDTSQPFPLQADVKAGDTRLAIVGTLTDPRHLAALDLRLWLQ
EECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEE
GTSMSHLYQLTGITLPDTPPYATEGRLIGNFKPNASTFRYENFNGRVGGSDLGGTLTWAQ
CCCHHHEEEECCEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECC
REPRPKLSGELVSNLLQFSDLAPVIGADSAASKKKRGDTTRQPPDRVLPVAAFRTERWSA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHEEEEHHHCCCCCCE
IDADVKFTGRKLIKSADLPITNLYTHILMQDGVLTLEPLQFGVAGGTLATNAHLDGSRTP
ECCCEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEECCCEEECCCCEEEECCCCCCCCCC
LKGRFTLAARHLKLKQLFPTQKVMQSAFGEINGDASLSATGNSPAALAATSTGEVKALIT
CCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEEE
NGRISRLLMEAAGLNVANVVYEKLFGNRDVNINCAAIDFVATDGMLDPKVFALDTDDALI
CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEECCCEEE
NVDGPINLRDESLDLKIHPHTKGFRIFSLRSPLYAKGTFKNPKVGVDAGALALRAGAMVG
ECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHH
LGLINPFAALIPLIAPSNNRDVPCSELFGQMKAQAAQKAAKKAGK
HHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLTRAIGKSAAWIVGIVAVLIAAAGIFIFTFDWNRAKPWVNEQVSTALGRPFAINGDLK
CCHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHCCCCEEECCCEE
VGWRRPDGETGWRAWVPWPSFSATQLEIGNPDWAQAPKFVTLDAAHFDLALLPLLAHEIV
EEEECCCCCCCCEEEECCCCCCCEEEECCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHH
IPSIDVVNPAVDLERRADGSNTWTFQFKQSSQPSRWKVRLDSFGFAKGTVTYRDAITKAD
CCCCHHCCCCHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEHHHHHCCCC
LTVAIDTLGQPIPLGDVLKEQEQTSRAASAQRVGKHGAAQLGAKADAQAASGESGASAVA
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHH
ASGASAASGVASAASGSSGSSASSAPSASAAAAASGASGAAAPAKPSGPTYAFGLKVDGR
CCCCCHHHCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCE
YKNVPISGTGKVGGVLAIQDTSQPFPLQADVKAGDTRLAIVGTLTDPRHLAALDLRLWLQ
EECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEE
GTSMSHLYQLTGITLPDTPPYATEGRLIGNFKPNASTFRYENFNGRVGGSDLGGTLTWAQ
CCCHHHEEEECCEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECC
REPRPKLSGELVSNLLQFSDLAPVIGADSAASKKKRGDTTRQPPDRVLPVAAFRTERWSA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHEEEEHHHCCCCCCE
IDADVKFTGRKLIKSADLPITNLYTHILMQDGVLTLEPLQFGVAGGTLATNAHLDGSRTP
ECCCEEECCHHHHHHCCCCHHHHHHHHHHHCCCEEECCCEEECCCCEEEECCCCCCCCCC
LKGRFTLAARHLKLKQLFPTQKVMQSAFGEINGDASLSATGNSPAALAATSTGEVKALIT
CCCEEEEHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEEE
NGRISRLLMEAAGLNVANVVYEKLFGNRDVNINCAAIDFVATDGMLDPKVFALDTDDALI
CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEECCCEEE
NVDGPINLRDESLDLKIHPHTKGFRIFSLRSPLYAKGTFKNPKVGVDAGALALRAGAMVG
ECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHH
LGLINPFAALIPLIAPSNNRDVPCSELFGQMKAQAAQKAAKKAGK
HHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]