Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yjjA [C]
Identifier: 116689781
GI number: 116689781
Start: 1957918
End: 1958406
Strand: Reverse
Name: yjjA [C]
Synonym: Bcen2424_1760
Alternate gene names: 116689781
Gene position: 1958406-1957918 (Counterclockwise)
Preceding gene: 116689784
Following gene: 116689779
Centisome position: 56.21
GC content: 68.1
Gene sequence:
>489_bases ATGAATGCACGTCTTTACCGCGCGACCGTTGCCGGCGCGCTGATCGGATTGCTCGCGCCGTTTTCGGTCGCCCATGCGCA ACTGGGCGACGTCCTGAAACAGGTCGGTGGTGGCGGCGATTCGGGCGGCAGCGCGGGCGGGGCGCTCGGCAACCTCGGCG GCCTTGGTGGCGCGCTGACGGGCGGCGGCGGTGCGTCGCTGACGCCGGGCAGTACCGGCAACGTCGCGGGCCTGCTGCAG TTCTGTATCCAGAACAACTATCTTGGCGGCGCAACGGGCAGCGGCGCATCGTCGGTGAAGGACGCGCTGCTCGGCAAGCT CGGCGGCACCGCGTCCGCGTCGTCCGACAGCGGCTATACGAGCGGCGCGAGCGGGATTCTCGACGCAGGCAACGGCAGCA AGCTCGACCTGAGCGGCGGCGGCCTGAAGCAGCAAGTGACCAAGCAGATTTGTGACAAGGTGCTGACGCAGGCCAAGTCG CTGCTGTAA
Upstream 100 bases:
>100_bases TGACGTTTCATGCGGCTTCGAAGGCTGTCATGCCCCGCTCGATTGCGTATCCTTGAATGCGATTCGCGGTATTCACGCAG TCACAACCGGGAGGCTTTAC
Downstream 100 bases:
>100_bases GCGCATCGGCACGCGTCGCGCGTGCCAGCGCCGGGGGCGGTGCGCAGGTGCTGCCCCCGTCAGTCATTCCGGCCGTGACG TTCGTCATGGCGAAAAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALTGGGGASLTPGSTGNVAGLLQ FCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYTSGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKS LL
Sequences:
>Translated_162_residues MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALTGGGGASLTPGSTGNVAGLLQ FCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYTSGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKS LL >Mature_162_residues MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALTGGGGASLTPGSTGNVAGLLQ FCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYTSGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKS LL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15265; Mature: 15265
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGGGASLTPGSTGNVAGLLQFCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYT CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC SGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKSLL CCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GGGGASLTPGSTGNVAGLLQFCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYT CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC SGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKSLL CCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA