Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yjjA [C]

Identifier: 116689781

GI number: 116689781

Start: 1957918

End: 1958406

Strand: Reverse

Name: yjjA [C]

Synonym: Bcen2424_1760

Alternate gene names: 116689781

Gene position: 1958406-1957918 (Counterclockwise)

Preceding gene: 116689784

Following gene: 116689779

Centisome position: 56.21

GC content: 68.1

Gene sequence:

>489_bases
ATGAATGCACGTCTTTACCGCGCGACCGTTGCCGGCGCGCTGATCGGATTGCTCGCGCCGTTTTCGGTCGCCCATGCGCA
ACTGGGCGACGTCCTGAAACAGGTCGGTGGTGGCGGCGATTCGGGCGGCAGCGCGGGCGGGGCGCTCGGCAACCTCGGCG
GCCTTGGTGGCGCGCTGACGGGCGGCGGCGGTGCGTCGCTGACGCCGGGCAGTACCGGCAACGTCGCGGGCCTGCTGCAG
TTCTGTATCCAGAACAACTATCTTGGCGGCGCAACGGGCAGCGGCGCATCGTCGGTGAAGGACGCGCTGCTCGGCAAGCT
CGGCGGCACCGCGTCCGCGTCGTCCGACAGCGGCTATACGAGCGGCGCGAGCGGGATTCTCGACGCAGGCAACGGCAGCA
AGCTCGACCTGAGCGGCGGCGGCCTGAAGCAGCAAGTGACCAAGCAGATTTGTGACAAGGTGCTGACGCAGGCCAAGTCG
CTGCTGTAA

Upstream 100 bases:

>100_bases
TGACGTTTCATGCGGCTTCGAAGGCTGTCATGCCCCGCTCGATTGCGTATCCTTGAATGCGATTCGCGGTATTCACGCAG
TCACAACCGGGAGGCTTTAC

Downstream 100 bases:

>100_bases
GCGCATCGGCACGCGTCGCGCGTGCCAGCGCCGGGGGCGGTGCGCAGGTGCTGCCCCCGTCAGTCATTCCGGCCGTGACG
TTCGTCATGGCGAAAAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALTGGGGASLTPGSTGNVAGLLQ
FCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYTSGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKS
LL

Sequences:

>Translated_162_residues
MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALTGGGGASLTPGSTGNVAGLLQ
FCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYTSGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKS
LL
>Mature_162_residues
MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALTGGGGASLTPGSTGNVAGLLQ
FCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYTSGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKS
LL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15265; Mature: 15265

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GGGGASLTPGSTGNVAGLLQFCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYT
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
SGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKSLL
CCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNARLYRATVAGALIGLLAPFSVAHAQLGDVLKQVGGGGDSGGSAGGALGNLGGLGGALT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GGGGASLTPGSTGNVAGLLQFCIQNNYLGGATGSGASSVKDALLGKLGGTASASSDSGYT
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
SGASGILDAGNGSKLDLSGGGLKQQVTKQICDKVLTQAKSLL
CCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA