Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689747

Identifier: 116689747

GI number: 116689747

Start: 1919282

End: 1919713

Strand: Direct

Name: 116689747

Synonym: Bcen2424_1726

Alternate gene names: NA

Gene position: 1919282-1919713 (Clockwise)

Preceding gene: 116689746

Following gene: 116689757

Centisome position: 55.09

GC content: 69.91

Gene sequence:

>432_bases
ATGCTCGAACTCAAGCAACTCGATCTGCGTACCGATCCGCAGGCCCGTCGCGTCGTCAAGGACGAAACCGTCGCCGTGTC
CTTCGCGGACGCCGACGGCGAACTGATGAGCCTCGAAGGCCCGAACCGTTATGTCGCGGGCGACGCGCTGATCACCGGCT
CGACCGGCGACCGCTGGGTCGTGTCGCGCGCGCGCTTCGACGCCAAATACCTGCCCGCCGATCCGGCACTCGCGCACGGC
ACGCCGGGCGCCTACCGCAACCGGCCAGCCGTCGTGCTCGCGCGCCGGATGGACGAGGCGTTTACGATCGCCCGCTCGGA
AAACGGCGACACGCTGCGCGGCGCCGCCGGCGACTGGGTGATGCAATACGCGCCCGGCGACTACGGCGTCGTGCAGGCGC
AGCGCTTCGCGCAGGTCTACCGCGACGCGTAA

Upstream 100 bases:

>100_bases
TGCCGGCCCGCCCGGGGCCGATCGGCGACCGGCGCGTCACACGGCGCGCCGAATTCGGGATAAGCTCCCGGCTTTTCCCG
CTTTCCCGCCCTTCCCCGCC

Downstream 100 bases:

>100_bases
CGCGTAACGCACCGCGCCGGCCGAGACCGGCGCCACGGCTCACGCAAAGTCTTCGTCGAGTTCGAGTTCCGCGTCGCGCT
CGACGGCCTCGCCGGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLELKQLDLRTDPQARRVVKDETVAVSFADADGELMSLEGPNRYVAGDALITGSTGDRWVVSRARFDAKYLPADPALAHG
TPGAYRNRPAVVLARRMDEAFTIARSENGDTLRGAAGDWVMQYAPGDYGVVQAQRFAQVYRDA

Sequences:

>Translated_143_residues
MLELKQLDLRTDPQARRVVKDETVAVSFADADGELMSLEGPNRYVAGDALITGSTGDRWVVSRARFDAKYLPADPALAHG
TPGAYRNRPAVVLARRMDEAFTIARSENGDTLRGAAGDWVMQYAPGDYGVVQAQRFAQVYRDA
>Mature_143_residues
MLELKQLDLRTDPQARRVVKDETVAVSFADADGELMSLEGPNRYVAGDALITGSTGDRWVVSRARFDAKYLPADPALAHG
TPGAYRNRPAVVLARRMDEAFTIARSENGDTLRGAAGDWVMQYAPGDYGVVQAQRFAQVYRDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15676; Mature: 15676

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELKQLDLRTDPQARRVVKDETVAVSFADADGELMSLEGPNRYVAGDALITGSTGDRWV
CCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCCCEEEECCEEEECCCCCEEE
VSRARFDAKYLPADPALAHGTPGAYRNRPAVVLARRMDEAFTIARSENGDTLRGAAGDWV
EEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCEE
MQYAPGDYGVVQAQRFAQVYRDA
EEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLELKQLDLRTDPQARRVVKDETVAVSFADADGELMSLEGPNRYVAGDALITGSTGDRWV
CCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCCCEEEECCEEEECCCCCEEE
VSRARFDAKYLPADPALAHGTPGAYRNRPAVVLARRMDEAFTIARSENGDTLRGAAGDWV
EEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCEE
MQYAPGDYGVVQAQRFAQVYRDA
EEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA