Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689719
Identifier: 116689719
GI number: 116689719
Start: 1886018
End: 1886389
Strand: Direct
Name: 116689719
Synonym: Bcen2424_1697
Alternate gene names: NA
Gene position: 1886018-1886389 (Clockwise)
Preceding gene: 116689717
Following gene: 116689720
Centisome position: 54.14
GC content: 66.67
Gene sequence:
>372_bases ATGTCTGCCACCTGGTTCAAAGGGTCCTGCCATTGCGGGGCCGTCAAATTCGAAGTCATCGCGGCCATTGCACCGGCCGT CCGCTGCAACTGCAGCCTGTGCCGCCGGCGCGGCGCGCTGATGAGCCCGATGTTCGCCGCCGCCCACCTGACGATCGTCG AAGGCGAGGGCGCGCTGACGTGCTATCGCTTCAACACGCACACGGCGCGCCACTATTTCTGCAGCCGGTGCGGCGTCTAT CCGTTCCACCAGACCCGCAAGGACCCGGCATGCTGGCGCGTCAATCTGGGTTGCCTCGACGGCGTCGATCCGACCGCGCT CGACGCGACGGTCCTCGATGGCGCGAGCCTTTCGGTCGTGGAGGACGCATGA
Upstream 100 bases:
>100_bases GTGCAATGTCCTGTATCTGCGCCGAGCGCGGATACAGTGCGATACAACGCCCGCGCGCGGGTTCGCTATAAAGCAGGCGT GACCTCTTTCGGAGCCCGTC
Downstream 100 bases:
>100_bases AGCGCTGGCTGATGATCCTGCTGTTTGCCGCGGGCGGGCTCGCGACCGAAATCGCGCATCCGGTGCAGTGCACGTTGCTG TCGATCAGCCGTCAGCCAAC
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Gfa-Like Protein; Plasmid PRiA4b ORF-3 Family Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Protein Gfa; Glutathione-Dependent Formaldehyde-Activating Family
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSATWFKGSCHCGAVKFEVIAAIAPAVRCNCSLCRRRGALMSPMFAAAHLTIVEGEGALTCYRFNTHTARHYFCSRCGVY PFHQTRKDPACWRVNLGCLDGVDPTALDATVLDGASLSVVEDA
Sequences:
>Translated_123_residues MSATWFKGSCHCGAVKFEVIAAIAPAVRCNCSLCRRRGALMSPMFAAAHLTIVEGEGALTCYRFNTHTARHYFCSRCGVY PFHQTRKDPACWRVNLGCLDGVDPTALDATVLDGASLSVVEDA >Mature_122_residues SATWFKGSCHCGAVKFEVIAAIAPAVRCNCSLCRRRGALMSPMFAAAHLTIVEGEGALTCYRFNTHTARHYFCSRCGVYP FHQTRKDPACWRVNLGCLDGVDPTALDATVLDGASLSVVEDA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=94, Percent_Identity=40.4255319148936, Blast_Score=76, Evalue=8e-15, Organism=Caenorhabditis elegans, GI25149380, Length=117, Percent_Identity=35.8974358974359, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25149382, Length=90, Percent_Identity=41.1111111111111, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13316; Mature: 13185
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATWFKGSCHCGAVKFEVIAAIAPAVRCNCSLCRRRGALMSPMFAAAHLTIVEGEGALT CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEEECCCCEE CYRFNTHTARHYFCSRCGVYPFHQTRKDPACWRVNLGCLDGVDPTALDATVLDGASLSVV EEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEE EDA ECC >Mature Secondary Structure SATWFKGSCHCGAVKFEVIAAIAPAVRCNCSLCRRRGALMSPMFAAAHLTIVEGEGALT CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEEECCCCEE CYRFNTHTARHYFCSRCGVYPFHQTRKDPACWRVNLGCLDGVDPTALDATVLDGASLSVV EEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEE EDA ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA