Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is iucB [H]
Identifier: 116689664
GI number: 116689664
Start: 1822886
End: 1823917
Strand: Direct
Name: iucB [H]
Synonym: Bcen2424_1642
Alternate gene names: 116689664
Gene position: 1822886-1823917 (Clockwise)
Preceding gene: 116689663
Following gene: 116689665
Centisome position: 52.32
GC content: 74.71
Gene sequence:
>1032_bases ATGCTGGCTGAAGTGCGCCCGGACGGATTCACGATGCTCGATACCTACCGGCTCGCGTTCGCGGACGGCCTGTTCGCCGC GCGCGATGGCGCGGAGATCCGCGTCGCGCAGGGCGACGGGATCGGCGCGCAGTTGCTGCGCGCGCAGCTCGGCGACGACG GCGCGCTGCGCCTGGTCGCCTACAACCATCGCGTGGCGCCAGCCGATCAGCGGCGGGCGCTACTGGCCGCACTCGCCGCG GCGTTTTCGGACAGCGCGCGCCACGCGGCGATTCGGCTCGACCCGGCCGCATGGCCGGCCGTCGCGCTCGACGCGCTGCG CGCGAGCGGCGTGCTGGCCGACGGCGGCCGCTGCCTGCGCGACGGCTGGGCGCAACAGGCCGACCTGTGGCGCGTCGGCC CGTCTCTGCCGTGCGCGACGCTGCCGACGATCACCGACGGCCGGCGTCATCCGCGCCGGCCGCCCGCACCGCGCGGCGAC GTCTATGCGCGCGATCTGCCGGCGCTCGGCGTGCGCTTCACGTTGCGCGGCTGGCAGCCGGCGGAGGACACCGAGCGGCT CGCGCGCTGGTTCGACGAGCCGCGCGTGCGCGACGGCTGGCCGGGCGCGCAGCCCGCCCAACGCGGCACGGAAGGCCCGC AGGAAGCCGATCCGCACGTGACGCCGCTGGTCGGCTGTTTCGACGGCGAGCCGTTCGCGTATTTCGAGGCGTTCTGGCTG AAGGAGGACGCGCTCGGGCCGCACGTCGCGGCGCGCGACTACGACCGCGGGCTGCGGATGCTGGTTGGCGAGCCGCGCTG GCGCGGCGCGCATCGCGTGGCCGGCTGGCTGCCGTCCGTCGTGCATTACCTGTTTCTCGACGACCTGCGTACCGAAGCGG TCGGCTGTGCCGTTCCGGCCGGCCACACGCGGGTTGCCGACCATCTCGCGCGGCATGGCTTCGCGCGGCAGCGCCGTCTC GCGCTGGCCGACGCGCAGCCGTTGTGGATGCGCACGCTGCGCGAGACGTTCTTCTCCGGCCGTCACGTCTGA
Upstream 100 bases:
>100_bases GGCCATGCGCTGACGGTGGCCGACGTGTTCGCGGCACCGACGCTCGCGGCGCTCGGCGCGCGGCTCGATGCGCACGCGGA AACGGGACAGGAGGCGCGCC
Downstream 100 bases:
>100_bases CGGGCCGGATTCACCGACAAGGAAGCTGAGACATGCAGAGAGAAACCGTATTCGACCTGATCGGCGTCGGCTTCGGGCCG TCGAATCTGGCGCTGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLAEVRPDGFTMLDTYRLAFADGLFAARDGAEIRVAQGDGIGAQLLRAQLGDDGALRLVAYNHRVAPADQRRALLAALAA AFSDSARHAAIRLDPAAWPAVALDALRASGVLADGGRCLRDGWAQQADLWRVGPSLPCATLPTITDGRRHPRRPPAPRGD VYARDLPALGVRFTLRGWQPAEDTERLARWFDEPRVRDGWPGAQPAQRGTEGPQEADPHVTPLVGCFDGEPFAYFEAFWL KEDALGPHVAARDYDRGLRMLVGEPRWRGAHRVAGWLPSVVHYLFLDDLRTEAVGCAVPAGHTRVADHLARHGFARQRRL ALADAQPLWMRTLRETFFSGRHV
Sequences:
>Translated_343_residues MLAEVRPDGFTMLDTYRLAFADGLFAARDGAEIRVAQGDGIGAQLLRAQLGDDGALRLVAYNHRVAPADQRRALLAALAA AFSDSARHAAIRLDPAAWPAVALDALRASGVLADGGRCLRDGWAQQADLWRVGPSLPCATLPTITDGRRHPRRPPAPRGD VYARDLPALGVRFTLRGWQPAEDTERLARWFDEPRVRDGWPGAQPAQRGTEGPQEADPHVTPLVGCFDGEPFAYFEAFWL KEDALGPHVAARDYDRGLRMLVGEPRWRGAHRVAGWLPSVVHYLFLDDLRTEAVGCAVPAGHTRVADHLARHGFARQRRL ALADAQPLWMRTLRETFFSGRHV >Mature_343_residues MLAEVRPDGFTMLDTYRLAFADGLFAARDGAEIRVAQGDGIGAQLLRAQLGDDGALRLVAYNHRVAPADQRRALLAALAA AFSDSARHAAIRLDPAAWPAVALDALRASGVLADGGRCLRDGWAQQADLWRVGPSLPCATLPTITDGRRHPRRPPAPRGD VYARDLPALGVRFTLRGWQPAEDTERLARWFDEPRVRDGWPGAQPAQRGTEGPQEADPHVTPLVGCFDGEPFAYFEAFWL KEDALGPHVAARDYDRGLRMLVGEPRWRGAHRVAGWLPSVVHYLFLDDLRTEAVGCAVPAGHTRVADHLARHGFARQRRL ALADAQPLWMRTLRETFFSGRHV
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR019432 [H]
Pfam domain/function: PF10331 AlcB [H]
EC number: NA
Molecular weight: Translated: 37783; Mature: 37783
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAEVRPDGFTMLDTYRLAFADGLFAARDGAEIRVAQGDGIGAQLLRAQLGDDGALRLVA CCCCCCCCCCEEHHHHHHHHHCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEE YNHRVAPADQRRALLAALAAAFSDSARHAAIRLDPAAWPAVALDALRASGVLADGGRCLR ECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCEEECCCHHHH DGWAQQADLWRVGPSLPCATLPTITDGRRHPRRPPAPRGDVYARDLPALGVRFTLRGWQP HHHHHHCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC AEDTERLARWFDEPRVRDGWPGAQPAQRGTEGPQEADPHVTPLVGCFDGEPFAYFEAFWL CHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH KEDALGPHVAARDYDRGLRMLVGEPRWRGAHRVAGWLPSVVHYLFLDDLRTEAVGCAVPA HHCCCCCCHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GHTRVADHLARHGFARQRRLALADAQPLWMRTLRETFFSGRHV CCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLAEVRPDGFTMLDTYRLAFADGLFAARDGAEIRVAQGDGIGAQLLRAQLGDDGALRLVA CCCCCCCCCCEEHHHHHHHHHCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEE YNHRVAPADQRRALLAALAAAFSDSARHAAIRLDPAAWPAVALDALRASGVLADGGRCLR ECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCEEECCCHHHH DGWAQQADLWRVGPSLPCATLPTITDGRRHPRRPPAPRGDVYARDLPALGVRFTLRGWQP HHHHHHCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC AEDTERLARWFDEPRVRDGWPGAQPAQRGTEGPQEADPHVTPLVGCFDGEPFAYFEAFWL CHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH KEDALGPHVAARDYDRGLRMLVGEPRWRGAHRVAGWLPSVVHYLFLDDLRTEAVGCAVPA HHCCCCCCHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GHTRVADHLARHGFARQRRLALADAQPLWMRTLRETFFSGRHV CCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]