Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689656
Identifier: 116689656
GI number: 116689656
Start: 1800277
End: 1801284
Strand: Direct
Name: 116689656
Synonym: Bcen2424_1634
Alternate gene names: NA
Gene position: 1800277-1801284 (Clockwise)
Preceding gene: 116689655
Following gene: 116689657
Centisome position: 51.67
GC content: 69.64
Gene sequence:
>1008_bases ATGACCCTGCTTTCGTTGCCGACGCTCGACGACCTGCGTATCGAGCCGGGGCTGCCCACCGTCGTGTCGCCGCGCGGCAG CGACGGAATGTCGATCGACGACGTCGCGCCGCTGGCGCGCGAGATCGCGGCCGACACGCTCGAACGGGCGGGCGGCGTGC TGTTCACGGGCTTTCACGTGCCGTCGATCGACGCGTTCCAGCAATTCGCGGCCTCGTTCGGCGATCCGCTGATCGGCTAT GAATACGCGTCGACGCCGCGCAGCCAGGTCGAAGGCGCGGTCTACACGTCGACCGAATACCCGCCGCACCGCGCGATTCC GCTGCACAACGAGCAGTCGTACACGCGCGAATGGCCGCTGCGGATCTGGTTCCACTGCGCGCTGGCCGCGCCGAAGGGCG GGGCGACGCCGATCGCGGACAGCCGTGCCGTGTATCGCGCGCTCGATCCCGCGCTCGTCGCGCGCTTCGAGAGGCGCGAG CTGCTGTACGTGCGCAATTTCGGGCAGGGGCTCGATCTGCCGTGGCAGCAGTCGTTCGGCACCGACGAGCCGGCCGAGGT CGAGCGGATGTGCGCGGCGCGCGGCATCGAATGTGCGTGGCGCACCGACGACGACGGCGAGCTGCTGCTGCGCACGCGCG AACGCTGCCAGGCCGTCGCGCGTCATCCGCGCACCGGCGAGCGCGTGTGGTTCAACCAGGCGAACCTGTTTCACCTGTCG GCGCTCGACGACGACATGCAGGAAGCGCTCGTCGACGCGGTCGGGCTCGAGAACGTGCCGCGCAACGTGTATTACGGCGA TGGCGAGCCGCTGGAGGCGGATGCGCTCGCGCAGATCCGCGGCGTGCTCGACCAGCAGCGCATCGTGTTCCCGTGGCGCA CCGGCGACGTGCTGATGCTCGACAACATGCTGACCGCGCATGCCCGCGACCCGTTCGAGGGGCCGCGCAAGGTCGTCGTC GCGATGGCGCAGAGTTACACGGTCCCGCGCGACCGAACGGAGGATTGA
Upstream 100 bases:
>100_bases CCCCGCGAGCCTGCGCCGCGCGATGGACGGCGAGCGCGCCACGCGCGCGTCGTGACCCGTTGCGCCGCGTGTGCGGCGCA CCACCTGAAGAGGACGTTGC
Downstream 100 bases:
>100_bases TGACGCGTAGTACCGCCGCGCTTGCCGCGCGCGGGCTGTCGGTGGGATATCGCGACCATGTCGTGATCGACGGGCTGGAC CTGTCGATCGCGGCCGGCCG
Product: taurine catabolism dioxygenase TauD/TfdA
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein B; Regulatory Protein; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Pyoverdine Biosynthesis Regulatory Gene; Amino Acid Adenylation Domain-Containing Protein; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Syrp Like Protein Albicidin Biosynthesis Regulation; Taurine Catabolism Dioxygenase Taud/Tfda; Regulatory Protein SyrP-Like; SyrP-Like Regulatory Protein; NRPS-Like Protein; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Syringomycin Synthesis Regulator SyrP; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHVPSIDAFQQFAASFGDPLIGY EYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPLRIWFHCALAAPKGGATPIADSRAVYRALDPALVARFERRE LLYVRNFGQGLDLPWQQSFGTDEPAEVERMCAARGIECAWRTDDDGELLLRTRERCQAVARHPRTGERVWFNQANLFHLS ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAQIRGVLDQQRIVFPWRTGDVLMLDNMLTAHARDPFEGPRKVVV AMAQSYTVPRDRTED
Sequences:
>Translated_335_residues MTLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHVPSIDAFQQFAASFGDPLIGY EYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPLRIWFHCALAAPKGGATPIADSRAVYRALDPALVARFERRE LLYVRNFGQGLDLPWQQSFGTDEPAEVERMCAARGIECAWRTDDDGELLLRTRERCQAVARHPRTGERVWFNQANLFHLS ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAQIRGVLDQQRIVFPWRTGDVLMLDNMLTAHARDPFEGPRKVVV AMAQSYTVPRDRTED >Mature_334_residues TLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHVPSIDAFQQFAASFGDPLIGYE YASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPLRIWFHCALAAPKGGATPIADSRAVYRALDPALVARFERREL LYVRNFGQGLDLPWQQSFGTDEPAEVERMCAARGIECAWRTDDDGELLLRTRERCQAVARHPRTGERVWFNQANLFHLSA LDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAQIRGVLDQQRIVFPWRTGDVLMLDNMLTAHARDPFEGPRKVVVA MAQSYTVPRDRTED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37409; Mature: 37278
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHV CCEECCCCCCCCEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC PSIDAFQQFAASFGDPLIGYEYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCE RIWFHCALAAPKGGATPIADSRAVYRALDPALVARFERRELLYVRNFGQGLDLPWQQSFG EEEEEEEEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCHHHCCC TDEPAEVERMCAARGIECAWRTDDDGELLLRTRERCQAVARHPRTGERVWFNQANLFHLS CCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEE ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAQIRGVLDQQRIVFPWRTGDVLML CCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEE DNMLTAHARDPFEGPRKVVVAMAQSYTVPRDRTED CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHV CEECCCCCCCCEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC PSIDAFQQFAASFGDPLIGYEYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCE RIWFHCALAAPKGGATPIADSRAVYRALDPALVARFERRELLYVRNFGQGLDLPWQQSFG EEEEEEEEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCHHHCCC TDEPAEVERMCAARGIECAWRTDDDGELLLRTRERCQAVARHPRTGERVWFNQANLFHLS CCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEE ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAQIRGVLDQQRIVFPWRTGDVLML CCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEE DNMLTAHARDPFEGPRKVVVAMAQSYTVPRDRTED CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA