Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689653
Identifier: 116689653
GI number: 116689653
Start: 1798714
End: 1798941
Strand: Reverse
Name: 116689653
Synonym: Bcen2424_1631
Alternate gene names: NA
Gene position: 1798941-1798714 (Counterclockwise)
Preceding gene: 116689661
Following gene: 116689652
Centisome position: 51.64
GC content: 68.42
Gene sequence:
>228_bases ATGAAATCCATCGTGTTATCCGCCGTCATGGCGGGCGCGCTGTCGAGCGTGATGCTCACCGGCTGCGTCGCCTACCCTGG CCCGGCCGAAGTCACGATCGGCTGGCATGGCGATCGTTACTGGGACGGAAATCGCTACTGGGAGCGCCGCGACTGGGAAG CCCGGCATGCCGGCCCGCGTGACGACCGCCGCGACGATCGCCGCGACGAACCCCGGCCGCAGTGGTGA
Upstream 100 bases:
>100_bases CGACGACGGGCTTGCACGTGTCATCGGCGGTAGCAACTTCTTACCACGTGAAATTTCGGGGGCTCGTACGATCGACTTGC CGTTTCCAAGGGAGAACAAC
Downstream 100 bases:
>100_bases TGCCGCTGCGCACCCTTGATCCATCATTGAACGACAGGACCTCGACATGAAGACGCTACTGAAAACCCTCACCGCCGCCG CCGTGGCCGCTGCCGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MKSIVLSAVMAGALSSVMLTGCVAYPGPAEVTIGWHGDRYWDGNRYWERRDWEARHAGPRDDRRDDRRDEPRPQW
Sequences:
>Translated_75_residues MKSIVLSAVMAGALSSVMLTGCVAYPGPAEVTIGWHGDRYWDGNRYWERRDWEARHAGPRDDRRDDRRDEPRPQW >Mature_75_residues MKSIVLSAVMAGALSSVMLTGCVAYPGPAEVTIGWHGDRYWDGNRYWERRDWEARHAGPRDDRRDDRRDEPRPQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8730; Mature: 8730
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIVLSAVMAGALSSVMLTGCVAYPGPAEVTIGWHGDRYWDGNRYWERRDWEARHAGPR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCC DDRRDDRRDEPRPQW CCCCCCCCCCCCCCC >Mature Secondary Structure MKSIVLSAVMAGALSSVMLTGCVAYPGPAEVTIGWHGDRYWDGNRYWERRDWEARHAGPR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCC DDRRDDRRDEPRPQW CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA