Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is gltJ [H]
Identifier: 116689640
GI number: 116689640
Start: 1782743
End: 1783465
Strand: Direct
Name: gltJ [H]
Synonym: Bcen2424_1618
Alternate gene names: 116689640
Gene position: 1782743-1783465 (Clockwise)
Preceding gene: 116689639
Following gene: 116689641
Centisome position: 51.17
GC content: 69.29
Gene sequence:
>723_bases ATGCTCGGGTTGGCTCCCAAATATCTGTCCTGGCTCTGGCAGGGCTTCCTGCTGACACTCGGCCTCGCGGCCGCGTCGGC CGTCGCCGCGACCGTCGGCGGGCTGCTGCTCGCCGTGATGCGGCATGCGCGCGGCAAGACGCCGCGCGCGGCCGCCGCCG CGTACGTCGTCGCGTTTCGCAACACGCCGCTGCTCGTGCAGTTGCTGTTCTGGTATTTCGGTGTCGCGTCGTTGCTGCCC GAAACGTGGATCGCGTGGCTCAATGCGCGCCATGCGGTGAGCGTGGGCCCGTTCACGCTCGCGTGGCCGTCGTTCGAATT CGTGGCGGGTTGGGTCGGCTTGAGCGCCTATACGGCTGCCTTCGTCGCCGAGGAATGCGAAGCCGGCCTGCGCGGCGTGC GGCGCGCGCAACACGATGCGGCGGCCGCGCTCGGCCTCACGCCGATGCAGTCGCTGCGCTACGTGGTGCTGCCGCAGGCC GTGCGCATCGCGCTGCCGCCGCTGTTCGGCCAATACATGAATCTCGTGAAGAACTCGTCGCTCGCGATGGCGATCGGCGT CGCCGAGCTGTCGTATGCGTCGCGGCAGGTCGAGACGGAGACGTTCCAGACGTTCGCCGCGTTCGGCGTCGCGACCCTGC TATATATCGCGGCGGTGGCCGCGATCGAGGCCGGTGCGTATGCAGCCACGCAATGGCGCGACCGGCTCGGAGCAGGGCGC TGA
Upstream 100 bases:
>100_bases ACCTGATCGCTGCCGCACGCGCGCCGCGTTTGGCCGGAACCTCGGCCGCGCGGCGCTTTTCGTTTTCATCCGACCGCGCG CGTCGTGCGCGCTCCCCAGC
Downstream 100 bases:
>100_bases CGATGGACCTTTCGCTGCTGCTTTCGAACCTGCCGTACCTGCTCGTCGGCGCGTTTCCGGACGGCCCGCTCGGCGGCGCC GCGCTGTCGCTGGTGCTGGC
Product: polar amino acid ABC transporter, inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLGLAPKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFRNTPLLVQLLFWYFGVASLLP ETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQA VRIALPPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQTFAAFGVATLLYIAAVAAIEAGAYAATQWRDRLGAGR
Sequences:
>Translated_240_residues MLGLAPKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFRNTPLLVQLLFWYFGVASLLP ETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQA VRIALPPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQTFAAFGVATLLYIAAVAAIEAGAYAATQWRDRLGAGR >Mature_240_residues MLGLAPKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFRNTPLLVQLLFWYFGVASLLP ETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQA VRIALPPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQTFAAFGVATLLYIAAVAAIEAGAYAATQWRDRLGAGR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=32.8703703703704, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=34.2995169082126, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI48994930, Length=128, Percent_Identity=42.1875, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=29.3838862559242, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=30.3921568627451, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=28.2926829268293, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1787087, Length=206, Percent_Identity=27.6699029126214, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87082239, Length=188, Percent_Identity=26.5957446808511, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25678; Mature: 25678
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLAPKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC NTPLLVQLLFWYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHH FVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC LAMAIGVAELSYASRQVETETFQTFAAFGVATLLYIAAVAAIEAGAYAATQWRDRLGAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MLGLAPKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC NTPLLVQLLFWYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHH FVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC LAMAIGVAELSYASRQVETETFQTFAAFGVATLLYIAAVAAIEAGAYAATQWRDRLGAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]