Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is cysU [H]
Identifier: 116689624
GI number: 116689624
Start: 1761856
End: 1762752
Strand: Direct
Name: cysU [H]
Synonym: Bcen2424_1602
Alternate gene names: 116689624
Gene position: 1761856-1762752 (Clockwise)
Preceding gene: 116689623
Following gene: 116689625
Centisome position: 50.57
GC content: 67.89
Gene sequence:
>897_bases ATGACGACGTACACCTTTCGCAAGCCGAGCGCGCTGCCCGGTTTCGGCGTGACACTCGGCATCACGGTGGCCTATTTGAG CCTCGTGGTGCTGATTCCGCTCGCCGCCACGTTCCTGAAGACCGCGACGCTGTCGTGGGACCAGTTCGTCACCGCCGTCA CGTCGCCGCGCGTGCTCGCGTCGTACCGGCTGACGTTCTCGGCCGCGCTCGGCGGCGCGCTGATCAATGCCGTGTTCGGC TTCCTCGTCGCATGGGTGCTGGTGCGCTACACGTTCCCGTTCAAGCGCCTCGTCGATGCGGTCGTCGACCTGCCGTTCGC GCTGCCGACGTCGGTGGCCGGCATCTCGCTCGCGGCCGTCTACGCGACCAACGGCTGGGTCGGCCAGTATCTGGCGCCGC TCGGCATCAAGATCGCGTTCACGCCGGCCGGCGTGCTGGTCGCGCTGACCTTCATCGGGCTGCCGTTCGTCGTGCGCACC GTGCAGCCGGTGCTCGAGGATTTCGAGCGCGAGCAGGAAGAAGCCGCCGCGTGCCTCGGCGCGTCGCGCTGGCTGACGTT CCGCCGCGTCGTGTTGCCGGCCGTGCTGCCGGCGCTGCTCACCGGTTTCGCGCTCGCGTTCGCGCGCGCGCTCGGCGAAT ACGGCTCGGTGATCTTCATCGCCGGCAACGTGCCGATGAAATCCGAGATCACGTCGCTATTGATCATCACGAAGCTCGAG CAGTACGACTACGCGGGCGCGACCGCGCTGGCGGTCGTGATGCTGGTCGTGTCGTTCCTGATGCTGCTGCTGATCAACAC GCTGCAGTGGTATCTGCAGCGTCGTACGAGCAAGGGCGCGAGCGGTCCGGCGCCCGCCACCGTCACCGCCGCTGCTGCCG CCGCAGGAGGCCAGTAA
Upstream 100 bases:
>100_bases CACGACAGCGCGCCGCACCCCCGACGGGCCGCCGGCGCGATTCACTGCGCCGGCGTTTGCGTCGGACCCGTGAGCAGCAT CGACCCAGCAAGAGCATCCG
Downstream 100 bases:
>100_bases TGACCCAGGAGGCCACCGTCGTGCTGAAAACCCCGTCGCCGGCCGCGCGTGCCGCGAAGCGGCTCGACCCCGTCAGCGAG TCGCGCGTCGTGCGCTGGCT
Product: sulfate ABC transporter, inner membrane subunit CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLAATFLKTATLSWDQFVTAVTSPRVLASYRLTFSAALGGALINAVFG FLVAWVLVRYTFPFKRLVDAVVDLPFALPTSVAGISLAAVYATNGWVGQYLAPLGIKIAFTPAGVLVALTFIGLPFVVRT VQPVLEDFEREQEEAAACLGASRWLTFRRVVLPAVLPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE QYDYAGATALAVVMLVVSFLMLLLINTLQWYLQRRTSKGASGPAPATVTAAAAAAGGQ
Sequences:
>Translated_298_residues MTTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLAATFLKTATLSWDQFVTAVTSPRVLASYRLTFSAALGGALINAVFG FLVAWVLVRYTFPFKRLVDAVVDLPFALPTSVAGISLAAVYATNGWVGQYLAPLGIKIAFTPAGVLVALTFIGLPFVVRT VQPVLEDFEREQEEAAACLGASRWLTFRRVVLPAVLPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE QYDYAGATALAVVMLVVSFLMLLLINTLQWYLQRRTSKGASGPAPATVTAAAAAAGGQ >Mature_297_residues TTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLAATFLKTATLSWDQFVTAVTSPRVLASYRLTFSAALGGALINAVFGF LVAWVLVRYTFPFKRLVDAVVDLPFALPTSVAGISLAAVYATNGWVGQYLAPLGIKIAFTPAGVLVALTFIGLPFVVRTV QPVLEDFEREQEEAAACLGASRWLTFRRVVLPAVLPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLEQ YDYAGATALAVVMLVVSFLMLLLINTLQWYLQRRTSKGASGPAPATVTAAAAAAGGQ
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=264, Percent_Identity=50, Blast_Score=252, Evalue=2e-68, Organism=Escherichia coli, GI87082099, Length=262, Percent_Identity=33.969465648855, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1786980, Length=202, Percent_Identity=34.1584158415842, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787369, Length=201, Percent_Identity=27.8606965174129, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786254, Length=227, Percent_Identity=28.1938325991189, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1787368, Length=245, Percent_Identity=27.3469387755102, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31645; Mature: 31514
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLAATFLKTATLSWDQFVTAVTSPRVLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH SYRLTFSAALGGALINAVFGFLVAWVLVRYTFPFKRLVDAVVDLPFALPTSVAGISLAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YATNGWVGQYLAPLGIKIAFTPAGVLVALTFIGLPFVVRTVQPVLEDFEREQEEAAACLG HCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLTFRRVVLPAVLPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH QYDYAGATALAVVMLVVSFLMLLLINTLQWYLQRRTSKGASGPAPATVTAAAAAAGGQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure TTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLAATFLKTATLSWDQFVTAVTSPRVLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH SYRLTFSAALGGALINAVFGFLVAWVLVRYTFPFKRLVDAVVDLPFALPTSVAGISLAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YATNGWVGQYLAPLGIKIAFTPAGVLVALTFIGLPFVVRTVQPVLEDFEREQEEAAACLG HCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLTFRRVVLPAVLPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH QYDYAGATALAVVMLVVSFLMLLLINTLQWYLQRRTSKGASGPAPATVTAAAAAAGGQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]