Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689620

Identifier: 116689620

GI number: 116689620

Start: 1758673

End: 1759392

Strand: Reverse

Name: 116689620

Synonym: Bcen2424_1598

Alternate gene names: NA

Gene position: 1759392-1758673 (Counterclockwise)

Preceding gene: 116689621

Following gene: 116689618

Centisome position: 50.5

GC content: 67.64

Gene sequence:

>720_bases
GTGACTGGATCGTCGCGCCGCGCATGGCGACTCAAGCCCCTGCTGATCGTCGCGCTGGTCGTCGCCCTGATTGGGGCGCT
CGGCTATGCGTACGCGTCGCCGTATGTCGCGCTCGGTCGCCTGAAATCGGCGATCGATGCGCGCGATGCGCAGGTGATCA
GCGAGTACGTCGACTTTCCGTCGCTGCGCATCAGTCTGAAGCAGCAGGTCACGGAAGAGTTGATGCGCCGGATCGACGCA
GTGAAGAAGGACAATCCGTTCGCGGTGATCGGCGCGCTGATCGGGTCCGCGCTGATCGGCCCGCTGGTCGATGCTTACGC
GACCCCGGAAGGCGTCGCCGCGCTGATGAGCGGATTGCCGCCGCGCGGCAATCCGGGCGAGCGTCCGCCTGAGTGGTCGA
ACCAGCCGCCGGCGGGGAATGCCCCCGGCAACACGCCTGCCGCACCGCCCGTCAATCCGGCGCCGGCAAGTGCTGCCGTA
CCGGGCAGCAATCCGGCCGCTTCGGCGGCATCGTCGCCGGCACCGGCGCCCGCCGCACCGGCCAGCCCGAGCGAAGCAAC
GCCAGCGCCGCGCCAGCAGCAAACTAGCGCGGGCTACCGAAATATCGATGAATTCGTCGTGACGTACCAGCGCAGCGCCG
ATGGCACGCGCTATGCGGCGATCTTCCACCGCTTCGGGCTGTTCTCGTGGAAATTGTCGGGGATCGACCTGCATGCATAG

Upstream 100 bases:

>100_bases
TCGATGCCGTGTGCCGGATGATCGATCACTGCATCGCAGAGGAACGATCGGCCACGCCGGGCGGTCTCTGATTGCGGAAC
CTTCCCGCACTGGAGGCAAC

Downstream 100 bases:

>100_bases
CAGGCCGTGCTCGACGTGCGCACTGCCGATGCAGTGCGATGCCTGACCGTCACGCATTGCCGGTCGGGTGGTCAGGGGGT
CCCCCAGCTTTTAGATCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFPSLRISLKQQVTEELMRRIDA
VKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLPPRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAV
PGSNPAASAASSPAPAPAAPASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA

Sequences:

>Translated_239_residues
MTGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFPSLRISLKQQVTEELMRRIDA
VKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLPPRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAV
PGSNPAASAASSPAPAPAAPASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA
>Mature_238_residues
TGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFPSLRISLKQQVTEELMRRIDAV
KKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLPPRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAVP
GSNPAASAASSPAPAPAAPASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24915; Mature: 24784

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLRISLKQQVTEELMRRIDAVKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAVPGSNPAASAASSPAPAPAAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA
CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure 
TGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLRISLKQQVTEELMRRIDAVKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAVPGSNPAASAASSPAPAPAAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA
CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA