Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689620
Identifier: 116689620
GI number: 116689620
Start: 1758673
End: 1759392
Strand: Reverse
Name: 116689620
Synonym: Bcen2424_1598
Alternate gene names: NA
Gene position: 1759392-1758673 (Counterclockwise)
Preceding gene: 116689621
Following gene: 116689618
Centisome position: 50.5
GC content: 67.64
Gene sequence:
>720_bases GTGACTGGATCGTCGCGCCGCGCATGGCGACTCAAGCCCCTGCTGATCGTCGCGCTGGTCGTCGCCCTGATTGGGGCGCT CGGCTATGCGTACGCGTCGCCGTATGTCGCGCTCGGTCGCCTGAAATCGGCGATCGATGCGCGCGATGCGCAGGTGATCA GCGAGTACGTCGACTTTCCGTCGCTGCGCATCAGTCTGAAGCAGCAGGTCACGGAAGAGTTGATGCGCCGGATCGACGCA GTGAAGAAGGACAATCCGTTCGCGGTGATCGGCGCGCTGATCGGGTCCGCGCTGATCGGCCCGCTGGTCGATGCTTACGC GACCCCGGAAGGCGTCGCCGCGCTGATGAGCGGATTGCCGCCGCGCGGCAATCCGGGCGAGCGTCCGCCTGAGTGGTCGA ACCAGCCGCCGGCGGGGAATGCCCCCGGCAACACGCCTGCCGCACCGCCCGTCAATCCGGCGCCGGCAAGTGCTGCCGTA CCGGGCAGCAATCCGGCCGCTTCGGCGGCATCGTCGCCGGCACCGGCGCCCGCCGCACCGGCCAGCCCGAGCGAAGCAAC GCCAGCGCCGCGCCAGCAGCAAACTAGCGCGGGCTACCGAAATATCGATGAATTCGTCGTGACGTACCAGCGCAGCGCCG ATGGCACGCGCTATGCGGCGATCTTCCACCGCTTCGGGCTGTTCTCGTGGAAATTGTCGGGGATCGACCTGCATGCATAG
Upstream 100 bases:
>100_bases TCGATGCCGTGTGCCGGATGATCGATCACTGCATCGCAGAGGAACGATCGGCCACGCCGGGCGGTCTCTGATTGCGGAAC CTTCCCGCACTGGAGGCAAC
Downstream 100 bases:
>100_bases CAGGCCGTGCTCGACGTGCGCACTGCCGATGCAGTGCGATGCCTGACCGTCACGCATTGCCGGTCGGGTGGTCAGGGGGT CCCCCAGCTTTTAGATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFPSLRISLKQQVTEELMRRIDA VKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLPPRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAV PGSNPAASAASSPAPAPAAPASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA
Sequences:
>Translated_239_residues MTGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFPSLRISLKQQVTEELMRRIDA VKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLPPRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAV PGSNPAASAASSPAPAPAAPASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA >Mature_238_residues TGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFPSLRISLKQQVTEELMRRIDAV KKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLPPRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAVP GSNPAASAASSPAPAPAAPASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24915; Mature: 24784
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLRISLKQQVTEELMRRIDAVKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC PRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAVPGSNPAASAASSPAPAPAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCC >Mature Secondary Structure TGSSRRAWRLKPLLIVALVVALIGALGYAYASPYVALGRLKSAIDARDAQVISEYVDFP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLRISLKQQVTEELMRRIDAVKKDNPFAVIGALIGSALIGPLVDAYATPEGVAALMSGLP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC PRGNPGERPPEWSNQPPAGNAPGNTPAAPPVNPAPASAAVPGSNPAASAASSPAPAPAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASPSEATPAPRQQQTSAGYRNIDEFVVTYQRSADGTRYAAIFHRFGLFSWKLSGIDLHA CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA