Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689599
Identifier: 116689599
GI number: 116689599
Start: 1740331
End: 1740795
Strand: Reverse
Name: 116689599
Synonym: Bcen2424_1577
Alternate gene names: NA
Gene position: 1740795-1740331 (Counterclockwise)
Preceding gene: 116689601
Following gene: 116689596
Centisome position: 49.97
GC content: 61.72
Gene sequence:
>465_bases ATGACGCTCGCTCACGCACGACAAAGCGGCGTAGATATCTGGATCGTCCAGCTTCCCGGGCACGCTCCCTATGCCTACAC GCACCTCAAGCGGGTATTCTCGTCCGACGACTCTCGACATCGGGTCGTGACGATCGACCTGAAGAAACTGCTGGCCTGCG CCGACCGCGACACCACCGACTATGTGCTGCCGTCGGTTCAGTACTGGGCGCCAGGAAAGGCCGCGGGCATTCGCGAATTC CTCGATCCGAACCGGGAGCGGATTCCGGACATGCCGTTCATCACGTTTCGCGAGACGAGAACGCGGACATTGCTCGGCAT TCCCGGCCTGTCGAAAATCGGCGTCGCATCGTTCCGTAACGGCCAGCATCGCGCGCGCTATCTCGCGCATGCCGGTGCCA CGACCTTGCCCGTCGAAATCCACGAGACCGAAGCCGATTTGCTTGTGCGGTATTGCGGCGAGTGA
Upstream 100 bases:
>100_bases GCCGCTCCGTTTTCCTGTTTCCGGTATCGACCTGCTCCGCAGCCGTCATCGCGCTGCTAAACTCGAATCACAAAGACCGC TTGCGCCACCAGAGGAAATC
Downstream 100 bases:
>100_bases CGGCAAAGTCCGGGCGGCTTTCACCTGGCGCTTCCATTGCGGCCAAGCGCAGGTGCACTCGCTTGCCGTCGCTACATCGA ACCGGCAAACGTTCAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTLAHARQSGVDIWIVQLPGHAPYAYTHLKRVFSSDDSRHRVVTIDLKKLLACADRDTTDYVLPSVQYWAPGKAAGIREF LDPNRERIPDMPFITFRETRTRTLLGIPGLSKIGVASFRNGQHRARYLAHAGATTLPVEIHETEADLLVRYCGE
Sequences:
>Translated_154_residues MTLAHARQSGVDIWIVQLPGHAPYAYTHLKRVFSSDDSRHRVVTIDLKKLLACADRDTTDYVLPSVQYWAPGKAAGIREF LDPNRERIPDMPFITFRETRTRTLLGIPGLSKIGVASFRNGQHRARYLAHAGATTLPVEIHETEADLLVRYCGE >Mature_153_residues TLAHARQSGVDIWIVQLPGHAPYAYTHLKRVFSSDDSRHRVVTIDLKKLLACADRDTTDYVLPSVQYWAPGKAAGIREFL DPNRERIPDMPFITFRETRTRTLLGIPGLSKIGVASFRNGQHRARYLAHAGATTLPVEIHETEADLLVRYCGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17354; Mature: 17223
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAHARQSGVDIWIVQLPGHAPYAYTHLKRVFSSDDSRHRVVTIDLKKLLACADRDTTD CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCCCCC YVLPSVQYWAPGKAAGIREFLDPNRERIPDMPFITFRETRTRTLLGIPGLSKIGVASFRN EECCCEEECCCCCCCHHHHHHCCCHHHCCCCCEEEEECCCCEEEEECCCCCHHCHHHCCC GQHRARYLAHAGATTLPVEIHETEADLLVRYCGE CHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCC >Mature Secondary Structure TLAHARQSGVDIWIVQLPGHAPYAYTHLKRVFSSDDSRHRVVTIDLKKLLACADRDTTD CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCCCCC YVLPSVQYWAPGKAAGIREFLDPNRERIPDMPFITFRETRTRTLLGIPGLSKIGVASFRN EECCCEEECCCCCCCHHHHHHCCCHHHCCCCCEEEEECCCCEEEEECCCCCHHCHHHCCC GQHRARYLAHAGATTLPVEIHETEADLLVRYCGE CHHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA