Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689583
Identifier: 116689583
GI number: 116689583
Start: 1726294
End: 1726722
Strand: Reverse
Name: 116689583
Synonym: Bcen2424_1561
Alternate gene names: NA
Gene position: 1726722-1726294 (Counterclockwise)
Preceding gene: 116689591
Following gene: 116689579
Centisome position: 49.56
GC content: 65.73
Gene sequence:
>429_bases ATGCAGAAAGTCATCCTGCCCTTCCTGTCCGGCTTCCTGGCCGCACTGTTCTTCCGCGAGGCCACGCTCGCCCTCCTCCA CACGGCCGACCTGATCGCCGCAACCGGCTTCTCGACACAACCGTTCGCGCCGCTCGGCATTCCTGAATTTGTCGCGAATG CGCTGATCAGCGCGTGCTGCGCAATTCCGATGGCGTGGTTGTTGCGCGTGTCGCCGGAACGCGAAGCATCGTGGATCGGC GCGCTCGTGTTCGGCGGTATCGTGCTGACGGCCGCCCGCGTGTTCGCGATCGATCCGCTGCGCGGCATCTGGCCTTCGGG CAACATGATGCCCGTGCTCGCGGCCGGCTTCGCGGCGAACGCAGTATGGGGCTTCGGCGCGCTCGTGTTCATGCGCGCGT TCATGTCGGACGACGCGGGCGACGAATAA
Upstream 100 bases:
>100_bases TGGAGCGAATATCGCCGCGGCCGGGCCCTATAATGGCGCACCTATCCGAATAACTCCGCGCATACGGCTTCGGCCGTGCG CGCCTGCGGTGCACTCATCG
Downstream 100 bases:
>100_bases CGCCAACGCGGGCGATGCGGCCTTCGGGCCCGGACCGGCCGACATCCATGAAAAAGGCCGCGTGCATCGTGCACGCGGCC TTTTCGTTTCTTCCCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACCAIPMAWLLRVSPEREASWIG ALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAANAVWGFGALVFMRAFMSDDAGDE
Sequences:
>Translated_142_residues MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACCAIPMAWLLRVSPEREASWIG ALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAANAVWGFGALVFMRAFMSDDAGDE >Mature_142_residues MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACCAIPMAWLLRVSPEREASWIG ALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAANAVWGFGALVFMRAFMSDDAGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15048; Mature: 15048
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AIPMAWLLRVSPEREASWIGALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAAN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH AVWGFGALVFMRAFMSDDAGDE HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AIPMAWLLRVSPEREASWIGALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAAN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH AVWGFGALVFMRAFMSDDAGDE HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA