Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689583

Identifier: 116689583

GI number: 116689583

Start: 1726294

End: 1726722

Strand: Reverse

Name: 116689583

Synonym: Bcen2424_1561

Alternate gene names: NA

Gene position: 1726722-1726294 (Counterclockwise)

Preceding gene: 116689591

Following gene: 116689579

Centisome position: 49.56

GC content: 65.73

Gene sequence:

>429_bases
ATGCAGAAAGTCATCCTGCCCTTCCTGTCCGGCTTCCTGGCCGCACTGTTCTTCCGCGAGGCCACGCTCGCCCTCCTCCA
CACGGCCGACCTGATCGCCGCAACCGGCTTCTCGACACAACCGTTCGCGCCGCTCGGCATTCCTGAATTTGTCGCGAATG
CGCTGATCAGCGCGTGCTGCGCAATTCCGATGGCGTGGTTGTTGCGCGTGTCGCCGGAACGCGAAGCATCGTGGATCGGC
GCGCTCGTGTTCGGCGGTATCGTGCTGACGGCCGCCCGCGTGTTCGCGATCGATCCGCTGCGCGGCATCTGGCCTTCGGG
CAACATGATGCCCGTGCTCGCGGCCGGCTTCGCGGCGAACGCAGTATGGGGCTTCGGCGCGCTCGTGTTCATGCGCGCGT
TCATGTCGGACGACGCGGGCGACGAATAA

Upstream 100 bases:

>100_bases
TGGAGCGAATATCGCCGCGGCCGGGCCCTATAATGGCGCACCTATCCGAATAACTCCGCGCATACGGCTTCGGCCGTGCG
CGCCTGCGGTGCACTCATCG

Downstream 100 bases:

>100_bases
CGCCAACGCGGGCGATGCGGCCTTCGGGCCCGGACCGGCCGACATCCATGAAAAAGGCCGCGTGCATCGTGCACGCGGCC
TTTTCGTTTCTTCCCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACCAIPMAWLLRVSPEREASWIG
ALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAANAVWGFGALVFMRAFMSDDAGDE

Sequences:

>Translated_142_residues
MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACCAIPMAWLLRVSPEREASWIG
ALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAANAVWGFGALVFMRAFMSDDAGDE
>Mature_142_residues
MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACCAIPMAWLLRVSPEREASWIG
ALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAANAVWGFGALVFMRAFMSDDAGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15048; Mature: 15048

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AIPMAWLLRVSPEREASWIGALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAAN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
AVWGFGALVFMRAFMSDDAGDE
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQKVILPFLSGFLAALFFREATLALLHTADLIAATGFSTQPFAPLGIPEFVANALISACC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AIPMAWLLRVSPEREASWIGALVFGGIVLTAARVFAIDPLRGIWPSGNMMPVLAAGFAAN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
AVWGFGALVFMRAFMSDDAGDE
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA