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The map label for this gene is yphH [C]

Identifier: 116689566

GI number: 116689566

Start: 1707567

End: 1708814

Strand: Reverse

Name: yphH [C]

Synonym: Bcen2424_1544

Alternate gene names: 116689566

Gene position: 1708814-1707567 (Counterclockwise)

Preceding gene: 116689567

Following gene: 116689565

Centisome position: 49.05

GC content: 71.96

Gene sequence:

>1248_bases
ATGAGAAGCCCGCACTTCGGCCAGGGAAGCAATTCGGCCAACGTGCGCCGTTACAACGAGCGCCTGCTGCTGAAGACGCT
GCGCCGCGCCGGCAGCGCATCGAAGGCCGACCTCGCCCGTCTCGCGAACATGACGGGTACGGCGGTCGGCAGCATCATCG
GGTCGCTCGCCGACGCGAAGCTGATCGAATTCGCGGGCCGCACCGAAGGCCAGCGCGGCCAGCCCGCATCGCTGATCCGC
CTCGATCCGCGCGGCGCGTTCGGCATCGGCGTCCATCTCGACCGGATGCGCATCGAGACGGCGCTCGTCAACTTCGCGGG
CGACGTGCTCGGCCGCCGCTCGCACGACACGCTGCTTCCCCCGCCCGCCGACGTGCTCGAGATCGTGCGTCACGATATCG
ACGCGATGCAGGCCCTCCTCCCCGACCATGAACGCGCGCGCCTGACCGGCGTCGGCGTCGCGCAGCCGTACAACCTCGGC
GCGTGGATGCGCGAGCTCGGCCTCGCACCCGACACGTTCCGCGCGTGGGAAGACGTCGATTTCGCCGCCGACCTCGGCCG
CACGCTGTCGCTGCCCGTATTCGGCGAGAACGACGGCAACGCGGCCGCGATCGCCGAACTGTTCTACGGATACGGCCGGC
AGTGCGACGACTTCGTCTACCTGTTCATCGGGCCGGCGATCGGCGGCGGCATCGCGATCGACGGCGACTGCCTGCGCGGC
GTGACCGGCAATGCCGGCGACATCGCGGTGATTCCGGTGCCGCCGAGCCGGCTGGCCTCCGCGCCGCCGCCGCGCGGCCC
GTGGGACATCCTGCTCGCACGCGCCTCGCTGCATGCGCTCGTGCGCCATCTGCGCCATCACGGCGAGACGGTCGAGAACC
GCGCCGATCTCGAAGCCTGCATCGCCCGCGGCCTGCCGGCCGTCGACGAATGGATCGACGACTGCGTCGACGCGCTCGCG
CCGGCGCTGCGCGCGGTGCTGTGCGTGATCGACGCGCCGGTGGTCGTGCTCGACGCCGACACCGACGCGGGCCTGCTCGA
CGCGGTCACGACCCGCCTGCGCGCGGCGCTCGTGGCCACCGCGCCCGAGGCCCGCGGCACGCCCGTGCTCGTGCGCGGCA
CGTTCGGCGCCGACGCAGGCGCGATCGGCGCCGCCACGCTGCCGATGTTTTTCAACTTCTCCCCGCGGGCCGGCATCCTC
AAGGGCGCCCGCACCGATTCGCAGGAGGTCCACCATGTCGCGTTCTGA

Upstream 100 bases:

>100_bases
GGGATTTCCCTAGGCTGACAGGCCGTCGCTCACGCGGTTAAATAAATCAACGTGATTTATTTAATGCGCCGCCGAACGGC
GCACCATGGAAGGAGACACC

Downstream 100 bases:

>100_bases
GTCGCCCCGCCCGCTGCTCGAGATGCGCGGGATCAGCAAGACGTTCCCGGCCGTACGCGCACTCGACAACGTCAGCCTGA
CCGTCTATCCGGGCGAGATC

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIGSLADAKLIEFAGRTEGQRGQPASLIR
LDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPADVLEIVRHDIDAMQALLPDHERARLTGVGVAQPYNLG
AWMRELGLAPDTFRAWEDVDFAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVENRADLEACIARGLPAVDEWIDDCVDALA
PALRAVLCVIDAPVVVLDADTDAGLLDAVTTRLRAALVATAPEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGIL
KGARTDSQEVHHVAF

Sequences:

>Translated_415_residues
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIGSLADAKLIEFAGRTEGQRGQPASLIR
LDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPADVLEIVRHDIDAMQALLPDHERARLTGVGVAQPYNLG
AWMRELGLAPDTFRAWEDVDFAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVENRADLEACIARGLPAVDEWIDDCVDALA
PALRAVLCVIDAPVVVLDADTDAGLLDAVTTRLRAALVATAPEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGIL
KGARTDSQEVHHVAF
>Mature_415_residues
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIGSLADAKLIEFAGRTEGQRGQPASLIR
LDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLPPPADVLEIVRHDIDAMQALLPDHERARLTGVGVAQPYNLG
AWMRELGLAPDTFRAWEDVDFAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVENRADLEACIARGLPAVDEWIDDCVDALA
PALRAVLCVIDAPVVVLDADTDAGLLDAVTTRLRAALVATAPEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGIL
KGARTDSQEVHHVAF

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787878, Length=248, Percent_Identity=22.5806451612903, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44033; Mature: 44033

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIGSLADAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIEFAGRTEGQRGQPASLIRLDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLP
HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PPADVLEIVRHDIDAMQALLPDHERARLTGVGVAQPYNLGAWMRELGLAPDTFRAWEDVD
CHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHCCH
FAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
HHHHCCCEEECEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCHHHCC
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVENRADLEAC
CCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IARGLPAVDEWIDDCVDALAPALRAVLCVIDAPVVVLDADTDAGLLDAVTTRLRAALVAT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
APEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGILKGARTDSQEVHHVAF
CCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCCCCCHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MRSPHFGQGSNSANVRRYNERLLLKTLRRAGSASKADLARLANMTGTAVGSIIGSLADAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIEFAGRTEGQRGQPASLIRLDPRGAFGIGVHLDRMRIETALVNFAGDVLGRRSHDTLLP
HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PPADVLEIVRHDIDAMQALLPDHERARLTGVGVAQPYNLGAWMRELGLAPDTFRAWEDVD
CHHHHHHHHHHHHHHHHHHCCCCHHCEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHCCH
FAADLGRTLSLPVFGENDGNAAAIAELFYGYGRQCDDFVYLFIGPAIGGGIAIDGDCLRG
HHHHCCCEEECEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCHHHCC
VTGNAGDIAVIPVPPSRLASAPPPRGPWDILLARASLHALVRHLRHHGETVENRADLEAC
CCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IARGLPAVDEWIDDCVDALAPALRAVLCVIDAPVVVLDADTDAGLLDAVTTRLRAALVAT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
APEARGTPVLVRGTFGADAGAIGAATLPMFFNFSPRAGILKGARTDSQEVHHVAF
CCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCCCCCHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]