Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689508

Identifier: 116689508

GI number: 116689508

Start: 1640430

End: 1641638

Strand: Direct

Name: 116689508

Synonym: Bcen2424_1486

Alternate gene names: NA

Gene position: 1640430-1641638 (Clockwise)

Preceding gene: 116689507

Following gene: 116689509

Centisome position: 47.09

GC content: 65.01

Gene sequence:

>1209_bases
ATGACTGATCTTCGTCTTACCATGCGGTTCGCTGCAGTGCTCGCCACCGGCGCGCTCGTCGCCGGTTGCGGTACGTCGTC
GCCCACGAAAGTGGACTACAAGAGCGATTCGAAATCGAAGGAAGCGTCGCTCGCAGTGCCGCCCAACATGCTCGACGAGA
CGGCCGATCAGCGTTCGCTGCCGCCCCAGGGCGGCGCGACTTCCCTGTCCGCGCTCCAGCAGGTCCAGCAGGCCGCGCCT
GCGCTGGACACCGTCGCGCCGGCCGTGGCCGGCATGCATATCCAGCGCGACGGCACCGAAAGTTGGCTCGTGATCGACGG
CAAGCAGCCCGCCGCGATCTGGCCGCAGGTGCGCCGCTTCTGGCAGGAGCAGGGCTTCCTGCTCGTCGTCGACCAGCGCG
ACAAGGGCGTGATGGAAACCGACTGGAACGAAACCCATCCGCAGATCAACGACGGCCTGATCCGCAGCGTGATCTCGAAG
GCGATGGGCAATTCGTACGTGACGGCAGAGCGCAACAAGTACCGCACGCGTCTCGATTCGGCGCCGAACGGCGGCACCTA
CGTGTTCATCAGCCAGAAGGGCATGCGCGAGGCGATCACCGGTGCGAACAACGATTCGAGCAAGTGGGAACCGAAGCCGA
ACGATCCGGCGCTCGAGACGGAATACCTGAAGCGGCTGATGGCCGTGCTCGCGCAGAACGAGCAGCGCGCGAAGAACGGC
GAGCCGCCGATCGCGAACATCAAGGACAACGCGGTACCGAAGGACAAGAAGGCCGATGGCGACGCGTCGTCGAAGGCTGC
CGCGGCGATCGCTGCCCAGAACGTCTCGCGCACGTCGGCGCAAGGCAATGACGCGGCTGAAGCGTCCGTGCCGTCCGAAG
TCACGCTCGGCGAGCCGTACGACCGGTCGTGGCTGCACGTCGGTCTCGCGCTCGATCGCGCGAACTTCACGGTCGACGAT
CGCGATCGCTCGAAGGGTCTGTACTTCGTGCGTTACGTCGATCCGAAGGATCTGAGCGCGGCCGAGCAGGGCTTCTGGAG
CCAGCTGTTCCACGGCAAGAAGGAAAAGCAGGCGAAGCAGTATCGCGTCAACGTGAAGGCGCTCACGGCCGATCAGACGC
GTGTCGCGGTCGTCGACGATGCGGGCGCGATCGATACGTCGTCGCCGGCTCGCCAGATCATGGGGTTGCTTGTGAATCAG
CTCCGCTGA

Upstream 100 bases:

>100_bases
CTTGGCCGTCGCTTTTTTGCACATCGCAGCGCGGCCCCGGTAAAATGCAAGGTTGATCCACGGAAAGCGCCGTGATTTAG
CGGAAGAGGATTCCCCGAAC

Downstream 100 bases:

>100_bases
TCCCCGCGTTTTCCGCCCCGTTGAAAAGCCCGCCATCCGGCGGGCTTTTTTCATGGCCGCTCGCCGACGTGTATGCCTGT
TCGGTGGGGCCCGTCCCTTC

Product: uncharacterized lipoprotein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSLPPQGGATSLSALQQVQQAAP
ALDTVAPAVAGMHIQRDGTESWLVIDGKQPAAIWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISK
AMGNSYVTAERNKYRTRLDSAPNGGTYVFISQKGMREAITGANNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG
EPPIANIKDNAVPKDKKADGDASSKAAAAIAAQNVSRTSAQGNDAAEASVPSEVTLGEPYDRSWLHVGLALDRANFTVDD
RDRSKGLYFVRYVDPKDLSAAEQGFWSQLFHGKKEKQAKQYRVNVKALTADQTRVAVVDDAGAIDTSSPARQIMGLLVNQ
LR

Sequences:

>Translated_402_residues
MTDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSLPPQGGATSLSALQQVQQAAP
ALDTVAPAVAGMHIQRDGTESWLVIDGKQPAAIWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISK
AMGNSYVTAERNKYRTRLDSAPNGGTYVFISQKGMREAITGANNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG
EPPIANIKDNAVPKDKKADGDASSKAAAAIAAQNVSRTSAQGNDAAEASVPSEVTLGEPYDRSWLHVGLALDRANFTVDD
RDRSKGLYFVRYVDPKDLSAAEQGFWSQLFHGKKEKQAKQYRVNVKALTADQTRVAVVDDAGAIDTSSPARQIMGLLVNQ
LR
>Mature_401_residues
TDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSLPPQGGATSLSALQQVQQAAPA
LDTVAPAVAGMHIQRDGTESWLVIDGKQPAAIWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISKA
MGNSYVTAERNKYRTRLDSAPNGGTYVFISQKGMREAITGANNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNGE
PPIANIKDNAVPKDKKADGDASSKAAAAIAAQNVSRTSAQGNDAAEASVPSEVTLGEPYDRSWLHVGLALDRANFTVDDR
DRSKGLYFVRYVDPKDLSAAEQGFWSQLFHGKKEKQAKQYRVNVKALTADQTRVAVVDDAGAIDTSSPARQIMGLLVNQL
R

Specific function: Unknown

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43710; Mature: 43579

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSL
CCCHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHHHHCCC
PPQGGATSLSALQQVQQAAPALDTVAPAVAGMHIQRDGTESWLVIDGKQPAAIWPQVRRF
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCEEEEEECCCCCHHHHHHHHH
WQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISKAMGNSYVTAERNKYRTRLDS
HHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCC
APNGGTYVFISQKGMREAITGANNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG
CCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCC
EPPIANIKDNAVPKDKKADGDASSKAAAAIAAQNVSRTSAQGNDAAEASVPSEVTLGEPY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCC
DRSWLHVGLALDRANFTVDDRDRSKGLYFVRYVDPKDLSAAEQGFWSQLFHGKKEKQAKQ
CCCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHH
YRVNVKALTADQTRVAVVDDAGAIDTSSPARQIMGLLVNQLR
HEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDLRLTMRFAAVLATGALVAGCGTSSPTKVDYKSDSKSKEASLAVPPNMLDETADQRSL
CCHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHHHHCCC
PPQGGATSLSALQQVQQAAPALDTVAPAVAGMHIQRDGTESWLVIDGKQPAAIWPQVRRF
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCEEEEEECCCCCHHHHHHHHH
WQEQGFLLVVDQRDKGVMETDWNETHPQINDGLIRSVISKAMGNSYVTAERNKYRTRLDS
HHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCC
APNGGTYVFISQKGMREAITGANNDSSKWEPKPNDPALETEYLKRLMAVLAQNEQRAKNG
CCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCC
EPPIANIKDNAVPKDKKADGDASSKAAAAIAAQNVSRTSAQGNDAAEASVPSEVTLGEPY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCC
DRSWLHVGLALDRANFTVDDRDRSKGLYFVRYVDPKDLSAAEQGFWSQLFHGKKEKQAKQ
CCCEEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHH
YRVNVKALTADQTRVAVVDDAGAIDTSSPARQIMGLLVNQLR
HEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]