Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is fusA [H]
Identifier: 116689471
GI number: 116689471
Start: 1603530
End: 1605047
Strand: Reverse
Name: fusA [H]
Synonym: Bcen2424_1449
Alternate gene names: 116689471
Gene position: 1605047-1603530 (Counterclockwise)
Preceding gene: 116689473
Following gene: 116689470
Centisome position: 46.07
GC content: 72.4
Gene sequence:
>1518_bases ATGGCCGGTTGCGCGAGCATGGGCGACAACAAAACCCAGTCCACTCGCATCGAAGCGAACGCACTCGACGCCGGCGCGGC CATCCGCGCGGCCGACCGCGACGCGGGCTGGCCCGCCGCCGACTGGTGGCGCGCGTACCGCGATCCCCAGCTCGATGCAT GGATCGCCGCCGCCCAGGCCGGCAACCCGACCCTCGCGGCCGCCGAGGCCCGCGTGCGCGAAGCGCAGGCGATGGCGCGC GTCGCCCGCTCGGCCGAACTGCCGCAGATCAACGGCAACCTGTCGCTGATGCGCCAGCACTGGCCGGACAACGTGTACTA CGGCCCGGGGCCGCTCGCGAACGCCGATACCTGGAACAATACCGGCTCGCTCGGCCTGTCGTACCACCTCGATCTGTGGG GCAAGGACAAGAACGCGACCGAGCGGGCGCTCGACACCGCGCATGCGACCGCCGCCGACGCGCGCGCGGCGAAGCTCGAA CTCGAAGTCAACGTGGTGCGCGCGTATGTCGGCATGTCGATGAACTACGCGCTGCTGGACCTCGCGCACGAGACGTTCGA ACGCCAGCGCTCGCTCGCCGATCTCGCGCGCAAGCGGCTGCAGGCCGGCCTCGGCACGCAGCTCGACGTGAGCCAGGCGG AATCGACGCTGCCCGACTACGAGCGCCAGATCGACAGCTACGAAGAGGCGATCCAGCTCGCGCGCCACCAGCTCGCCGCA CTGGCCGGCAAGGGCCCGGGCGCCGGCGACACCATCAAGCGGCCGCAGCTTGCGCTCGATGCGCCGGCCGGCCTGCCGTC GGCGATGCCGGCCGACCTGCTCGGCCGCCGCCCCGACGTCGTCGCGGCGCGCTGGACGGTCGACGCGCAGGCGCGCGGCA TCGACGTCGCGAAGGCGTCGTTCTACCCGAACATCGACCTGCTCGCGACGGTCGGCGGCTTCGGCGTGACCGCGCCGTTC ACCGACTTCCTGCGCGCGATGAACGGCGGCTGGACGGCCGGCCCCGCGCTGTCGCTGCCGATCTTCGAAGGCGGCCGGCT GCGGGCGCAGCTCGGCGCCGCGAACGCCGGCTACGACCAGGCGGTCGAGCGCTACAACCAGACGATCGTCGGTGCGCTCA AGGACATCGCCGACCAGGTCGTGCGAATCCGCTCGCTCGATACGCAGAAGAAGGACGCCGCGCGCTCGGTGGCGGCCAAC AATCGCAGCTATCAACTGTCGCGCGAAGGCTTCCGCCGCGGGCTGACCGATTACGTGAACGTGCTGGTCGCGCAGCAGCA ACTGCTGCGCGCGCAGGAGACGGCCGCCCGCATCGACGCCGAACGCCTCGCCGCGCACGCGCAGCTGATGGCCGCGCTCG GAGGTGGGGTCGAGACGGGTACCGATGTGCCAAAGGACGAAGCCGCCACCGCGGTTGCCGCGCCCGCCGCCGCGTCGGGC ACGAAGCCCGCGGCAGCCGTCGCCCGGCCCGCGGAAGTCGCCACCACCGGCGCGTCCGGCGTGCCGGCCGCACGGTAA
Upstream 100 bases:
>100_bases AATCGCCTCCGACTCATCTATATCCGAAAGGGAGAAAATCGTGCAGTCTCCGGCGACAAAAGGGACGCTCGCACTGGCGG TTCTTGCAGTCTCATTAATA
Downstream 100 bases:
>100_bases CGCGGAGCGTCGCCATGTCAGTCTCCTCCCCCGCTTCAACGCCCGCCGGCGGCCCGTTCGCGGCCTCGTATGCCGCATTC GGCGACTGGGCCCGCACCGA
Product: RND efflux system outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMAR VARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDYERQIDSYEEAIQLARHQLAA LAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPF TDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAAN NRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETGTDVPKDEAATAVAAPAAASG TKPAAAVARPAEVATTGASGVPAAR
Sequences:
>Translated_505_residues MAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMAR VARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLE LEVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDYERQIDSYEEAIQLARHQLAA LAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPF TDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAAN NRSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETGTDVPKDEAATAVAAPAAASG TKPAAAVARPAEVATTGASGVPAAR >Mature_504_residues AGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQAGNPTLAAAEARVREAQAMARV ARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNNTGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLEL EVNVVRAYVGMSMNYALLDLAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDYERQIDSYEEAIQLARHQLAAL AGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKASFYPNIDLLATVGGFGVTAPFT DFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQAVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANN RSYQLSREGFRRGLTDYVNVLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETGTDVPKDEAATAVAAPAAASGT KPAAAVARPAEVATTGASGVPAAR
Specific function: Involved in the resistance (detoxification) of the fungal toxin fusaric acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=473, Percent_Identity=29.3868921775898, Blast_Score=191, Evalue=7e-50, Organism=Escherichia coli, GI1786785, Length=443, Percent_Identity=29.5711060948081, Blast_Score=145, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 53404; Mature: 53273
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQA CCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCC GNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCCCC TGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYALLD CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCHHHHH LAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDYERQIDSYEEAIQLARHQLAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKAS HHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCEEEHHH FYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQ CCCCCHHEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECEECCCCCEEEECCCCCCCHHH AVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANNRSYQLSREGFRRGLTDYVN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECHHHHHCCHHHHHH VLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETGTDVPKDEAATAVAAPAAASG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC TKPAAAVARPAEVATTGASGVPAAR CCCHHHHCCCHHHHCCCCCCCCCCC >Mature Secondary Structure AGCASMGDNKTQSTRIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDAWIAAAQA CCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCC GNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMRQHWPDNVYYGPGPLANADTWNN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCCCC TGSLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYALLD CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCHHHHH LAHETFERQRSLADLARKRLQAGLGTQLDVSQAESTLPDYERQIDSYEEAIQLARHQLAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LAGKGPGAGDTIKRPQLALDAPAGLPSAMPADLLGRRPDVVAARWTVDAQARGIDVAKAS HHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCEEEHHH FYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQ CCCCCHHEEECCCCCCCCCHHHHHHHHCCCCCCCCEEECEECCCCCEEEECCCCCCCHHH AVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANNRSYQLSREGFRRGLTDYVN HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECHHHHHCCHHHHHH VLVAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETGTDVPKDEAATAVAAPAAASG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC TKPAAAVARPAEVATTGASGVPAAR CCCHHHHCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1370369 [H]