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The map label for this gene is iolB [H]

Identifier: 116689442

GI number: 116689442

Start: 1565406

End: 1566224

Strand: Reverse

Name: iolB [H]

Synonym: Bcen2424_1420

Alternate gene names: 116689442

Gene position: 1566224-1565406 (Counterclockwise)

Preceding gene: 116689443

Following gene: 116689441

Centisome position: 44.96

GC content: 68.01

Gene sequence:

>819_bases
ATGACGATTTCTCCCCTGCTGGTCAAGGCATCCGCCGACCGCGAGATCTGCAACGTCACGCCCGAATCGGCCGGCTGGAA
GCACGTCGGCTTTCGCGCGCTGCGCCTGAAGGCTGGCGATACCGAAACGGTCGACACCGGCACGCGCGAACTGTGCGTCG
TCGTGCTGACGGGCACGGTGCGTGCCGAAGTCGACGGCGAAACCTACGATGCGCTCGGCAAGCGCGACAGCGTGTTCGAG
GACGTGTCGCCGGACGCGCTGTACGTGCCGGGCGGCAAGCGCGTCACGCTGGTCGCGACGCGCGATGCGGAAGTCGCGCT
GTGCACCGCGCCGTACGCGAGCGGCGACAAGCGCGTGCTGCGCCTCGACGGCGAGCGGATGCGCCGCTCGGTGCGCGGGC
AAGGCACCAACACGCGCTACGTCTGCGACATCCTGATGGGCGACAATCCGGCCGCCGACCGGCTGCTCGTCGTCGAAGTC
GTCACGCCGGCCAGCCATTCGAGCAGCTATCCGCCGCACAAGCACGACCGCGACTCGGCGCCCGACGAGACGTCGCTCGA
GGAAACCTATTACCACCGGATCGATCCGCCGCAGGGTTTCGCGTTCCAGCGCGTGTACACCGACGATCGCAGCCTCGACG
AGGCCTGCGCGGTCGAGAACCATGACGTCGTGATGGTGCCGCGCGGCTATCACCCGGTGGTCGCGCCTCACGGCTACAAC
CTGTACTACCTGAACGTGATGGCGGGCCCGAGCCGCGCGTGGGCGTTCAAGAACGATCCCGCGCACGAGTGGATGCTCGA
CGCGGCGCCGAAACGTTGA

Upstream 100 bases:

>100_bases
GCTACGAATCGCTGCGCGCGATCGTCGACCGGTTGAGCGCGTAAGCCGGTACGAAGGCGCGTGAGCGCTCGAGCCCTACC
CTATTGCGGAGACCCATTTC

Downstream 100 bases:

>100_bases
AGTGCTGAAGATGTGCTGACGTGCTGAAACGCCGAAGCACTGAATGGAACACGGGCCCGCGCGCGGCCCTCGACGATGCG
ACGCCCGGCACGCGCGTACC

Product: myo-inositol catabolism IolB domain-containing protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTISPLLVKASADREICNVTPESAGWKHVGFRALRLKAGDTETVDTGTRELCVVVLTGTVRAEVDGETYDALGKRDSVFE
DVSPDALYVPGGKRVTLVATRDAEVALCTAPYASGDKRVLRLDGERMRRSVRGQGTNTRYVCDILMGDNPAADRLLVVEV
VTPASHSSSYPPHKHDRDSAPDETSLEETYYHRIDPPQGFAFQRVYTDDRSLDEACAVENHDVVMVPRGYHPVVAPHGYN
LYYLNVMAGPSRAWAFKNDPAHEWMLDAAPKR

Sequences:

>Translated_272_residues
MTISPLLVKASADREICNVTPESAGWKHVGFRALRLKAGDTETVDTGTRELCVVVLTGTVRAEVDGETYDALGKRDSVFE
DVSPDALYVPGGKRVTLVATRDAEVALCTAPYASGDKRVLRLDGERMRRSVRGQGTNTRYVCDILMGDNPAADRLLVVEV
VTPASHSSSYPPHKHDRDSAPDETSLEETYYHRIDPPQGFAFQRVYTDDRSLDEACAVENHDVVMVPRGYHPVVAPHGYN
LYYLNVMAGPSRAWAFKNDPAHEWMLDAAPKR
>Mature_271_residues
TISPLLVKASADREICNVTPESAGWKHVGFRALRLKAGDTETVDTGTRELCVVVLTGTVRAEVDGETYDALGKRDSVFED
VSPDALYVPGGKRVTLVATRDAEVALCTAPYASGDKRVLRLDGERMRRSVRGQGTNTRYVCDILMGDNPAADRLLVVEVV
TPASHSSSYPPHKHDRDSAPDETSLEETYYHRIDPPQGFAFQRVYTDDRSLDEACAVENHDVVMVPRGYHPVVAPHGYNL
YYLNVMAGPSRAWAFKNDPAHEWMLDAAPKR

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30075; Mature: 29944

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISPLLVKASADREICNVTPESAGWKHVGFRALRLKAGDTETVDTGTRELCVVVLTGTV
CCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECEE
RAEVDGETYDALGKRDSVFEDVSPDALYVPGGKRVTLVATRDAEVALCTAPYASGDKRVL
EEEECCCHHHHCCCCCCHHHCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCCEEE
RLDGERMRRSVRGQGTNTRYVCDILMGDNPAADRLLVVEVVTPASHSSSYPPHKHDRDSA
EECCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
PDETSLEETYYHRIDPPQGFAFQRVYTDDRSLDEACAVENHDVVMVPRGYHPVVAPHGYN
CCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEECCCCCCEECCCCCE
LYYLNVMAGPSRAWAFKNDPAHEWMLDAAPKR
EEEEEEEECCCCEEEECCCCCHHHEECCCCCC
>Mature Secondary Structure 
TISPLLVKASADREICNVTPESAGWKHVGFRALRLKAGDTETVDTGTRELCVVVLTGTV
CCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECEE
RAEVDGETYDALGKRDSVFEDVSPDALYVPGGKRVTLVATRDAEVALCTAPYASGDKRVL
EEEECCCHHHHCCCCCCHHHCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCCCCEEE
RLDGERMRRSVRGQGTNTRYVCDILMGDNPAADRLLVVEVVTPASHSSSYPPHKHDRDSA
EECCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
PDETSLEETYYHRIDPPQGFAFQRVYTDDRSLDEACAVENHDVVMVPRGYHPVVAPHGYN
CCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEECCCCCCEECCCCCE
LYYLNVMAGPSRAWAFKNDPAHEWMLDAAPKR
EEEEEEEECCCCEEEECCCCCHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA