Click here to switch to the map view.

The map label for this gene is nudC [H]

Identifier: 116689434

GI number: 116689434

Start: 1559065

End: 1559601

Strand: Direct

Name: nudC [H]

Synonym: Bcen2424_1412

Alternate gene names: 116689434

Gene position: 1559065-1559601 (Clockwise)

Preceding gene: 116689433

Following gene: 116689435

Centisome position: 44.75

GC content: 68.72

Gene sequence:

>537_bases
ATGACCACCGCCGACTACCGCTTTTGCCCGCGCTGCGCGAGCCCGCTGACCGAGCGGGCCGATCCCGACCATGAAGGCGG
CCGCGTCCGTCAGGCCTGCCCCGACGACACCTGCGGCTACGTGCACTGGAACAATCCGCTGCCGGTCGTCGCCGCGATCG
TCGAGCTCGACGGCAAGATCCTGCTCGCGCGCAACGCCGCGTGGCCCGAAGGGATGTTCGCGCTGATCACCGGCTTCCTC
GAAAACGGCGAGACGCCCGAGGACGGCATCGCCCGCGAGGTGTTCGAGGAAACCGCGCTGAAGGCCGAGCACGTGTCGCT
CGTCGGCGTGTACGAATTCATCCGCAAGAACGAGCTGATCATCGCGTACCACGTGCGGGCGTCCGGCACGGTGTCGCTGT
CGCCGGAACTGCTCGAATACAAACTCGTCGATCCGCCGCTGCTGCGCCCGTGGCGCGCCGGCACGGGCGTCGCGCTCGCC
GACTGGATGCGCACGCGCGGCCTCGATTTCGAATTCGTCGACCGGCCGGGGCAGTGA

Upstream 100 bases:

>100_bases
CGGGCGCGGGCAAACTCGCTAGAATGAAGCCTTTCCCGCGCCGAGCGGGTGTCCGACGCGGCCTGCAGGCCGATGCCCGG
CGCTCGCCAGATCCCCATCG

Downstream 100 bases:

>100_bases
CGCGCCGGCCTGCCCGCGGCGCGTCGTCCGCCGTGCCGCGCGCGATCGCGACGCGGCGCCGCGTTGCCTGCCGGCGCGCT
GCGCGGCCGCCGCGCGTCGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTTADYRFCPRCASPLTERADPDHEGGRVRQACPDDTCGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFL
ENGETPEDGIAREVFEETALKAEHVSLVGVYEFIRKNELIIAYHVRASGTVSLSPELLEYKLVDPPLLRPWRAGTGVALA
DWMRTRGLDFEFVDRPGQ

Sequences:

>Translated_178_residues
MTTADYRFCPRCASPLTERADPDHEGGRVRQACPDDTCGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFL
ENGETPEDGIAREVFEETALKAEHVSLVGVYEFIRKNELIIAYHVRASGTVSLSPELLEYKLVDPPLLRPWRAGTGVALA
DWMRTRGLDFEFVDRPGQ
>Mature_177_residues
TTADYRFCPRCASPLTERADPDHEGGRVRQACPDDTCGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFLE
NGETPEDGIAREVFEETALKAEHVSLVGVYEFIRKNELIIAYHVRASGTVSLSPELLEYKLVDPPLLRPWRAGTGVALAD
WMRTRGLDFEFVDRPGQ

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=133, Percent_Identity=35.3383458646617, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 19826; Mature: 19695

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTADYRFCPRCASPLTERADPDHEGGRVRQACPDDTCGYVHWNNPLPVVAAIVELDGKI
CCCCCCCCCCHHCCHHHHCCCCCCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHCCCEE
LLARNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEHVSLVGVYEFIRKNELI
EEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAYHVRASGTVSLSPELLEYKLVDPPLLRPWRAGTGVALADWMRTRGLDFEFVDRPGQ
EEEEECCCCEEEECHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure 
TTADYRFCPRCASPLTERADPDHEGGRVRQACPDDTCGYVHWNNPLPVVAAIVELDGKI
CCCCCCCCCHHCCHHHHCCCCCCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHCCCEE
LLARNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEHVSLVGVYEFIRKNELI
EEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAYHVRASGTVSLSPELLEYKLVDPPLLRPWRAGTGVALADWMRTRGLDFEFVDRPGQ
EEEEECCCCEEEECHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA