| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689425
Identifier: 116689425
GI number: 116689425
Start: 1548375
End: 1548761
Strand: Direct
Name: 116689425
Synonym: Bcen2424_1403
Alternate gene names: NA
Gene position: 1548375-1548761 (Clockwise)
Preceding gene: 116689424
Following gene: 116689426
Centisome position: 44.44
GC content: 65.63
Gene sequence:
>387_bases ATGTCGATGCGTGCATCCCTTTCCATCGTCACGCGTGTGCTGGCCGGCGCCGCGTGCGCAGCCGCGATGCTGCCCGCCCA TGCGCAGAACAACCTGAACTTCCTGAACGACACGCCGATCAGCTATTTCAGCAAGACCGACCGCGCGTCGCTCTCCAAGG CGGTCGTGCAGGCGCGCGACGAAGGCAAGGACGGCGAAACCACGACGTGGCAGAGCAACGGCCGCGGCACGCAGATCGAC GCGAAGCTCACGCCGAGCACGACCGAGACGGACGGCAAGACCTGCCGCGAAATCGCGACCGAAATCGCCGCGAAGGGCCA GACGATGACGCTCAAGCCCGTCTACTGCAAGACGGCCGCGGGCAAGTGGCAGTTGCAGAAGCGCTGA
Upstream 100 bases:
>100_bases ACCGCAGCACGCATGCTATGCTCGCTCGCTGACGGGCGTGGCGCATACCGGTTCGCCGGCATGCGCCACGCCGTTCGATC GAACATCCAAGGAGAAAAAC
Downstream 100 bases:
>100_bases GCACGCGCATGATGAAGCGGGGCGGCGCGCCGCGCACGGTGTCGTGCGGCGTCGTGATCCTCGATACGGCCGGCCGCGTG TTTCTCGCGCACGCGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSMRASLSIVTRVLAGAACAAAMLPAHAQNNLNFLNDTPISYFSKTDRASLSKAVVQARDEGKDGETTTWQSNGRGTQID AKLTPSTTETDGKTCREIATEIAAKGQTMTLKPVYCKTAAGKWQLQKR
Sequences:
>Translated_128_residues MSMRASLSIVTRVLAGAACAAAMLPAHAQNNLNFLNDTPISYFSKTDRASLSKAVVQARDEGKDGETTTWQSNGRGTQID AKLTPSTTETDGKTCREIATEIAAKGQTMTLKPVYCKTAAGKWQLQKR >Mature_127_residues SMRASLSIVTRVLAGAACAAAMLPAHAQNNLNFLNDTPISYFSKTDRASLSKAVVQARDEGKDGETTTWQSNGRGTQIDA KLTPSTTETDGKTCREIATEIAAKGQTMTLKPVYCKTAAGKWQLQKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13767; Mature: 13636
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRASLSIVTRVLAGAACAAAMLPAHAQNNLNFLNDTPISYFSKTDRASLSKAVVQARD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHC EGKDGETTTWQSNGRGTQIDAKLTPSTTETDGKTCREIATEIAAKGQTMTLKPVYCKTAA CCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCC GKWQLQKR CCEEECCC >Mature Secondary Structure SMRASLSIVTRVLAGAACAAAMLPAHAQNNLNFLNDTPISYFSKTDRASLSKAVVQARD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHC EGKDGETTTWQSNGRGTQIDAKLTPSTTETDGKTCREIATEIAAKGQTMTLKPVYCKTAA CCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCC GKWQLQKR CCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA