Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689422

Identifier: 116689422

GI number: 116689422

Start: 1543459

End: 1544997

Strand: Direct

Name: 116689422

Synonym: Bcen2424_1400

Alternate gene names: NA

Gene position: 1543459-1544997 (Clockwise)

Preceding gene: 116689421

Following gene: 116689424

Centisome position: 44.3

GC content: 67.84

Gene sequence:

>1539_bases
ATGATCGAGCGACGCAGGCGACGCCACGGCCGCCGCGTCGAGCGGGCCGCGCGCGTGTCGATCGTCGCGGGGCTGCTGTT
CGCGGGCGCCGACGCGGTGTGCGCGGAAACGGTAACTGCGTCGACTTCGAATTCGACTTCGACGCAAGAACCGGCGCCGG
CATCGACCGCGTCATCGGCTTCGGCGCCGGCCTCGACGTCGGCAGCGACCACGGCCTCGACGTGCACCGCCAAACGCCCG
ACGGTGCTGTTCAACCGCTGGCAGGAAGACTGGTCGGTGCTCGCGAATCCGTGCGTGCCGCGCGCGCCGCTCGACGGGTT
GAAATACCTTCCTCTCGGCAACGATCCGCAATCCTATCTGTCGCTCGGCGTGAACCTGCGCGAGCGTCTCGAGACCAACG
ACGCGCCGCTGTTCGGCATCGGCTCCGCGCAATCGGATACGTATCTGATCCAGCGCGTCGAAGTGCATGCCGATGCGCAT
CTCGGCCCGCACTGGCAATTCTTCGCGCAGTTGCAGGACGCACGCGCGTTCGGCAAGAACACGGTGTCGCCGGTCGACAG
GAACCCGCTCGATCTCGAACAGGCGTTCGCGACCTACACGGGCGCGCTCGGCGGCGGCACGGTCAAGTTCCGCGTCGGCC
GGCAGGAGATGGCGTTCGACCTGCAGCGCTTCATCGCCGCGCGCGACGGCCCGAACGTGCGGCTCGCGTTCGATGCGGTG
TGGGCCGACTACGAATACGGCAAGTGGCGCTTCATCGGCTATGCGACGCAGCCGGTGCAGAACCGCAACGCGTCCGATTT
CGACGACGTGTCGAATCGCGATCTCACGTTCAGCGGCGTGCGCTTCGAGCGGCAGTCGGTCGGGCCGGGCGACCTGTCCG
GCTACTGGTCGCGCTACAACCGCCGCGGCGCGCGTTTTCTCGATGCGAGCGGCCCCGAGCATCGCGACGTATGGGACGTT
CGCTACACGGGCACGCACGGGCGCTTCGACTGGGATCTCGAAACGATGCTGCAGACCGGCACGGTCGGCAACGCCACGAT
CGGCGCGTGGGCCGTCGGTTCGATCGCCGGCTACAGGCTCGACGCGCCGTGGTCGCCGCGCATCGCGCTGCAGGTCGACG
CGGCATCGGGCGACCGGCATCTGCACGACGGCCGCGTCGGCACCTTCAATCCGCTGTTTCCGAACGGCTATTACTTCACG
CTGGCCGGCTATACGAGTTACGCGAACCTGATTCACGTGAAGCCGTCGGTGACGCTGAAACCGTCGGCGAACCTGTCGCT
GCTCGGCGCGCTGGGCTTCCAGTGGCGGGAGACGACCGGCGACGCCGTCTATCAGCAGCCGAACATCCCGGTGCCGGGCA
CGGCGGGCAAGGGCGGGTTGTGGACCGGCATGTACGTGCAACTGCGCGCGGACTGGACGATCGCCGCGAACCTGATCGGC
GCGATCGAGGCCGTGCATTTCCAGGTCGGCGACGCGATCCGGCAGGCAGGCGGGCACAACGCGGATTACGTCGGCGTCGA
GCTGAAGTACGGCTGGTGA

Upstream 100 bases:

>100_bases
GCTATGTCGGGTTCCTGGCGCTGCTGGTGCCCGTCGGCGCGCTCGCGATGCTCGCGCTGTGCGCGGCGCCATCAGCCGGC
ACCACCACGCAGGAGCGCGC

Downstream 100 bases:

>100_bases
CGGCGGCGCGCGGCAACCCGCACGCGACATGAAAAAGGGCAGCCCCGCGGGGCTGCCCTTCGTTCGTCCGGGCCGGCAGT
TTGGTCGGCCCGTTCGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MIERRRRRHGRRVERAARVSIVAGLLFAGADAVCAETVTASTSNSTSTQEPAPASTASSASAPASTSAATTASTCTAKRP
TVLFNRWQEDWSVLANPCVPRAPLDGLKYLPLGNDPQSYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAH
LGPHWQFFAQLQDARAFGKNTVSPVDRNPLDLEQAFATYTGALGGGTVKFRVGRQEMAFDLQRFIAARDGPNVRLAFDAV
WADYEYGKWRFIGYATQPVQNRNASDFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRRGARFLDASGPEHRDVWDV
RYTGTHGRFDWDLETMLQTGTVGNATIGAWAVGSIAGYRLDAPWSPRIALQVDAASGDRHLHDGRVGTFNPLFPNGYYFT
LAGYTSYANLIHVKPSVTLKPSANLSLLGALGFQWRETTGDAVYQQPNIPVPGTAGKGGLWTGMYVQLRADWTIAANLIG
AIEAVHFQVGDAIRQAGGHNADYVGVELKYGW

Sequences:

>Translated_512_residues
MIERRRRRHGRRVERAARVSIVAGLLFAGADAVCAETVTASTSNSTSTQEPAPASTASSASAPASTSAATTASTCTAKRP
TVLFNRWQEDWSVLANPCVPRAPLDGLKYLPLGNDPQSYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAH
LGPHWQFFAQLQDARAFGKNTVSPVDRNPLDLEQAFATYTGALGGGTVKFRVGRQEMAFDLQRFIAARDGPNVRLAFDAV
WADYEYGKWRFIGYATQPVQNRNASDFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRRGARFLDASGPEHRDVWDV
RYTGTHGRFDWDLETMLQTGTVGNATIGAWAVGSIAGYRLDAPWSPRIALQVDAASGDRHLHDGRVGTFNPLFPNGYYFT
LAGYTSYANLIHVKPSVTLKPSANLSLLGALGFQWRETTGDAVYQQPNIPVPGTAGKGGLWTGMYVQLRADWTIAANLIG
AIEAVHFQVGDAIRQAGGHNADYVGVELKYGW
>Mature_512_residues
MIERRRRRHGRRVERAARVSIVAGLLFAGADAVCAETVTASTSNSTSTQEPAPASTASSASAPASTSAATTASTCTAKRP
TVLFNRWQEDWSVLANPCVPRAPLDGLKYLPLGNDPQSYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAH
LGPHWQFFAQLQDARAFGKNTVSPVDRNPLDLEQAFATYTGALGGGTVKFRVGRQEMAFDLQRFIAARDGPNVRLAFDAV
WADYEYGKWRFIGYATQPVQNRNASDFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRRGARFLDASGPEHRDVWDV
RYTGTHGRFDWDLETMLQTGTVGNATIGAWAVGSIAGYRLDAPWSPRIALQVDAASGDRHLHDGRVGTFNPLFPNGYYFT
LAGYTSYANLIHVKPSVTLKPSANLSLLGALGFQWRETTGDAVYQQPNIPVPGTAGKGGLWTGMYVQLRADWTIAANLIG
AIEAVHFQVGDAIRQAGGHNADYVGVELKYGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55972; Mature: 55972

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERRRRRHGRRVERAARVSIVAGLLFAGADAVCAETVTASTSNSTSTQEPAPASTASSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCC
SAPASTSAATTASTCTAKRPTVLFNRWQEDWSVLANPCVPRAPLDGLKYLPLGNDPQSYL
CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHH
SLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGPHWQFFAQLQDARAFGKN
HHCCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
TVSPVDRNPLDLEQAFATYTGALGGGTVKFRVGRQEMAFDLQRFIAARDGPNVRLAFDAV
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEEE
WADYEYGKWRFIGYATQPVQNRNASDFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYN
ECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECEEEECCCCCCCCHHHHHHHHC
RRGARFLDASGPEHRDVWDVRYTGTHGRFDWDLETMLQTGTVGNATIGAWAVGSIAGYRL
CCCCEEECCCCCCCCCEEEEEEECCCCEECCCHHHHHHCCCCCCCEECCEEHHCCCCEEE
DAPWSPRIALQVDAASGDRHLHDGRVGTFNPLFPNGYYFTLAGYTSYANLIHVKPSVTLK
CCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEC
PSANLSLLGALGFQWRETTGDAVYQQPNIPVPGTAGKGGLWTGMYVQLRADWTIAANLIG
CCCCEEEEEECCCEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHH
AIEAVHFQVGDAIRQAGGHNADYVGVELKYGW
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MIERRRRRHGRRVERAARVSIVAGLLFAGADAVCAETVTASTSNSTSTQEPAPASTASSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCC
SAPASTSAATTASTCTAKRPTVLFNRWQEDWSVLANPCVPRAPLDGLKYLPLGNDPQSYL
CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHH
SLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGPHWQFFAQLQDARAFGKN
HHCCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
TVSPVDRNPLDLEQAFATYTGALGGGTVKFRVGRQEMAFDLQRFIAARDGPNVRLAFDAV
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEEE
WADYEYGKWRFIGYATQPVQNRNASDFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYN
ECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECEEEECCCCCCCCHHHHHHHHC
RRGARFLDASGPEHRDVWDVRYTGTHGRFDWDLETMLQTGTVGNATIGAWAVGSIAGYRL
CCCCEEECCCCCCCCCEEEEEEECCCCEECCCHHHHHHCCCCCCCEECCEEHHCCCCEEE
DAPWSPRIALQVDAASGDRHLHDGRVGTFNPLFPNGYYFTLAGYTSYANLIHVKPSVTLK
CCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEC
PSANLSLLGALGFQWRETTGDAVYQQPNIPVPGTAGKGGLWTGMYVQLRADWTIAANLIG
CCCCEEEEEECCCEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHH
AIEAVHFQVGDAIRQAGGHNADYVGVELKYGW
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA