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The map label for this gene is 116689379

Identifier: 116689379

GI number: 116689379

Start: 1495335

End: 1496495

Strand: Reverse

Name: 116689379

Synonym: Bcen2424_1357

Alternate gene names: NA

Gene position: 1496495-1495335 (Counterclockwise)

Preceding gene: 116689385

Following gene: 116689377

Centisome position: 42.95

GC content: 67.18

Gene sequence:

>1161_bases
ATGAAACGCACGACCCTCTCGCTGATTTCGCTCGCGTCGTTCGCGGCGATGCCCGTCGCGCATGCGCAATCGAGCGTCAC
GCTGTATGGCGTGATCGACACGTCGATCACCTATGTGAATCACGCACAGGGCAAGGACAACGCGTGGATGCTCGGCAACA
GCAGCGCGGGTAACCTCGCCGGCAGCCGCTGGGGCGTGAAAGGCACCGAGGATCTCGGCGGCGGGCTGAAGGCACTGTTC
CAGCTGGAAAACGGCTTCGACCCGAGCAACGGCCGGCAGGGCCAGGGCGGCCGCCTGTTCGGCCGTCAGGCCTTCGTCGG
CCTGACGAGCGACCGCTACGGCACGCTCACGTTCGGCCGCCAGTACGACCCGCTCGTCGACCTCGTGCAGGGCATCACCG
CCGACAACTACCTGGGCAGCGCGTTCGCGACGCCGGGCGACGTCGACAACTACGACAACAGCTTCCGCGTCGACAACGCG
GTGAAGTACACGTCGGCCGTCTATTCGGGCCTGCAGTTCGCGGCGATGTATTCGTTCGGCGGGATCGCCGGCAGCACCGG
CGCCGCGCAGTCGTACTCGGCCGCCGTGTCGTACAACAACGGGCCGTTCAGCGTCGCCGGCGGCTACTTCCACGCGACCA
ACAGCCCCGCGTCAAACGGCGTGCGCAACGGCTGGACCAGCTCGTCGGACGGCACGTTCGACGGCCCGATCAACAGCGGC
TATGCCAGCGCGCACTCGTTCGGCATCGCGCGCATCGCGGGCCAGTACGTCGCCGGCCCGTTCACGTTCGGCGTCGGCTA
CAGCAATGCGCAATACCGCCGCGACGCGAGCTCGGTGTTCGGCTCGAACGAGCACTACAACACGGGGCAAGGCTTCGTGA
ACTACCAGGCGACGAACGCGCTGCTCGTCGGTGTCGGCTACAGCTACACGCGCTCGGGCGGCGACACGTCGGCGACCTAT
CACCAGGTATCGGCCGGCGCCGACTACAGCCTGTCGAAGCGCACCGACGTCTACCTGACCGCCGCGTATCAGCACGCAAG
CGGCCAGACCGGCGACGGCAACGGCGGCTCGATGGCCGCGCAGGCATCGATCGGCTCGTACGGTTATGCGGGCACGAGCT
CGCAGACGATGGTCAACCTCGGCCTGCGTCACCGCTTCTGA

Upstream 100 bases:

>100_bases
AGGCCACAACGGAGAATTTCATTTTTGCCGTTTTATCGCGGCTCTGTAGTCTCCTGCCATTCCGGATCACGAACCCCCAC
CAATGCGCCAAGGAGATGAC

Downstream 100 bases:

>100_bases
TCGCGAATCGCGATACCCGGAGACGGCCGACTGCGCTCCACGTGGCCGGTCGACTCCCGCATTGCACATACGGCGGCTTC
GGCCGCCGATTTTTTGCCGC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKRTTLSLISLASFAAMPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLAGSRWGVKGTEDLGGGLKALF
QLENGFDPSNGRQGQGGRLFGRQAFVGLTSDRYGTLTFGRQYDPLVDLVQGITADNYLGSAFATPGDVDNYDNSFRVDNA
VKYTSAVYSGLQFAAMYSFGGIAGSTGAAQSYSAAVSYNNGPFSVAGGYFHATNSPASNGVRNGWTSSSDGTFDGPINSG
YASAHSFGIARIAGQYVAGPFTFGVGYSNAQYRRDASSVFGSNEHYNTGQGFVNYQATNALLVGVGYSYTRSGGDTSATY
HQVSAGADYSLSKRTDVYLTAAYQHASGQTGDGNGGSMAAQASIGSYGYAGTSSQTMVNLGLRHRF

Sequences:

>Translated_386_residues
MKRTTLSLISLASFAAMPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLAGSRWGVKGTEDLGGGLKALF
QLENGFDPSNGRQGQGGRLFGRQAFVGLTSDRYGTLTFGRQYDPLVDLVQGITADNYLGSAFATPGDVDNYDNSFRVDNA
VKYTSAVYSGLQFAAMYSFGGIAGSTGAAQSYSAAVSYNNGPFSVAGGYFHATNSPASNGVRNGWTSSSDGTFDGPINSG
YASAHSFGIARIAGQYVAGPFTFGVGYSNAQYRRDASSVFGSNEHYNTGQGFVNYQATNALLVGVGYSYTRSGGDTSATY
HQVSAGADYSLSKRTDVYLTAAYQHASGQTGDGNGGSMAAQASIGSYGYAGTSSQTMVNLGLRHRF
>Mature_386_residues
MKRTTLSLISLASFAAMPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLAGSRWGVKGTEDLGGGLKALF
QLENGFDPSNGRQGQGGRLFGRQAFVGLTSDRYGTLTFGRQYDPLVDLVQGITADNYLGSAFATPGDVDNYDNSFRVDNA
VKYTSAVYSGLQFAAMYSFGGIAGSTGAAQSYSAAVSYNNGPFSVAGGYFHATNSPASNGVRNGWTSSSDGTFDGPINSG
YASAHSFGIARIAGQYVAGPFTFGVGYSNAQYRRDASSVFGSNEHYNTGQGFVNYQATNALLVGVGYSYTRSGGDTSATY
HQVSAGADYSLSKRTDVYLTAAYQHASGQTGDGNGGSMAAQASIGSYGYAGTSSQTMVNLGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40277; Mature: 40277

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTTLSLISLASFAAMPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECEEEEEECCCCCCCEEEEECCCCCCCC
GSRWGVKGTEDLGGGLKALFQLENGFDPSNGRQGQGGRLFGRQAFVGLTSDRYGTLTFGR
CCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECC
QYDPLVDLVQGITADNYLGSAFATPGDVDNYDNSFRVDNAVKYTSAVYSGLQFAAMYSFG
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCC
GIAGSTGAAQSYSAAVSYNNGPFSVAGGYFHATNSPASNGVRNGWTSSSDGTFDGPINSG
CCCCCCCCCCCEEEEEEECCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
YASAHSFGIARIAGQYVAGPFTFGVGYSNAQYRRDASSVFGSNEHYNTGQGFVNYQATNA
CCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCE
LLVGVGYSYTRSGGDTSATYHQVSAGADYSLSKRTDVYLTAAYQHASGQTGDGNGGSMAA
EEEECCCEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEE
QASIGSYGYAGTSSQTMVNLGLRHRF
EECCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKRTTLSLISLASFAAMPVAHAQSSVTLYGVIDTSITYVNHAQGKDNAWMLGNSSAGNLA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECEEEEEECCCCCCCEEEEECCCCCCCC
GSRWGVKGTEDLGGGLKALFQLENGFDPSNGRQGQGGRLFGRQAFVGLTSDRYGTLTFGR
CCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECC
QYDPLVDLVQGITADNYLGSAFATPGDVDNYDNSFRVDNAVKYTSAVYSGLQFAAMYSFG
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCC
GIAGSTGAAQSYSAAVSYNNGPFSVAGGYFHATNSPASNGVRNGWTSSSDGTFDGPINSG
CCCCCCCCCCCEEEEEEECCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
YASAHSFGIARIAGQYVAGPFTFGVGYSNAQYRRDASSVFGSNEHYNTGQGFVNYQATNA
CCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCE
LLVGVGYSYTRSGGDTSATYHQVSAGADYSLSKRTDVYLTAAYQHASGQTGDGNGGSMAA
EEEECCCEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEE
QASIGSYGYAGTSSQTMVNLGLRHRF
EECCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]