Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is rstB [H]
Identifier: 116689373
GI number: 116689373
Start: 1489886
End: 1491271
Strand: Reverse
Name: rstB [H]
Synonym: Bcen2424_1351
Alternate gene names: 116689373
Gene position: 1491271-1489886 (Counterclockwise)
Preceding gene: 116689374
Following gene: 116689368
Centisome position: 42.8
GC content: 67.97
Gene sequence:
>1386_bases ATGCTGCGCCCGTTGCTCCGGTTGTACCTCGTCGTGATCCTGTTCGTCGGTGCGTCGATCATCTTCATCCAGCTGTCGTT CGACCGGATCTTCTATGAACGCGGCGCGCAGGCGCAGCGCGATTCGCTGACGACCTATTCGTTCGTGCTGAACGACTACC TCGAACGCCATCCGGGCGCGCAGCGCGAGCTCGCATTGCGCGAACTCGCGCTGCATGGCCGCGAAGGATTCGGCTTCATG TCGATGGCCGACGCGCGTGCGCAACTGAGCGGCGCGCCGTTGCGCGATCTCGATGCCGGCAGGATCGCGATCAGCTACAA CGGCAAGGATTACTACATGCCGCTCGCGGACGGCTCGGTGCTGCATGCCCGCCCGATCGAAGCGCCCGACCTCGACATCC GGATCTATGCGTACATGCTGCTCGCGCTCGCGACGCTGTTCGCGGTCGTGCTGTGGATTCACTATCACTGGCGCGACATT CGCCGGCTGCAGGATGCCGCGCGCGCGTTCGGCGCCGGAATGCTGTCGACACGCGTGAAGCTGTCGGGCAAGTCGAACAT CTACGAGCTGTCGCAGCAGTTCAACGACATGGCCGCGCGTATCGAGGCGTCGATCAAGCAGCAGCGCGAAATGATGCACG GCATCTCGCATGAACTGAAAACGCCGCTCGCCCGGCTCGAATTCGGGCTCGCGCTGCTCGCCGACGCCGACGAGACGGGC CGGATGCGCGAGCGCCGCGACGCGCTGCGACGCGACGTGCGCGAACTCGACGAGCTCGTCACCGAGTTGCTGACGATCGG CCGGCTCGAACAGGGTGCGAGCGAGCTCGCGCCGATGGAAGTCGTCGTCGATGCGCTGATCGACAGCGTCGCCGGCAACG TCGCGGACGACATCGCCGATCGCGGCATCGCGCTCGACGTGTCGACGTTCGACGCGCCCGCGACCCACGTCTGCGATCCG AAGCTCGTCGCCCGCGCGCTGCTGAACCTGATTCGCAACGGCGCCCGCTATGCGTCGCGCAAGGTCGTGCTGGCCGCGAC CCGCGACCCGTCCGGCGCGCTCGTGCTGAGCGTCGACGACGATGGCCCCGGCATTCCGGCCGCCGAACGCGCCCGCGTGT TCGAGCCGTTCCAGCGGCTGGATTCGAGCCGCGACCGTCAGACCGGCGGTTTCGGGCTCGGGCTCGCGATCGTGCGGCGC GTCGCGCAGGTGCACGGCGGCGACGTGCGGCTCGAGGATTCGCCGCTCGGCGGCGCGCGCTTCGTGATCACGCTGCCCGT GCGTGCGCTGCCGGACAGTCTGTTCGACGTCGCGCAGCACGTGGAAAGCACGCATGCCGATGCGCGCCGCCGCAGCGGCA CGGGCACGGTCGTCCCGCTTCGATGA
Upstream 100 bases:
>100_bases GCTGCGCCGCCGCTTCGAGGATGCGTCATCGGAGCCGCACAAGATCAAGACGATCTGGGGTCGCGGCTACCTGTTCAGCC CTTCTGCGTGGGACGAGTAA
Downstream 100 bases:
>100_bases AAACGGCGGCGGGCGCCTACCCGCCCCCGCGTGACCGCGCCTTCGCTCAGCGCCGGCGCAACAGCGCGACGAAGAACAGG CTGCCGAACAGCGCGGTCAC
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGAQRELALRELALHGREGFGFM SMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSVLHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDI RRLQDAARAFGAGMLSTRVKLSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG RMRERRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGIALDVSTFDAPATHVCDP KLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRR VAQVHGGDVRLEDSPLGGARFVITLPVRALPDSLFDVAQHVESTHADARRRSGTGTVVPLR
Sequences:
>Translated_461_residues MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGAQRELALRELALHGREGFGFM SMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSVLHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDI RRLQDAARAFGAGMLSTRVKLSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG RMRERRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGIALDVSTFDAPATHVCDP KLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRR VAQVHGGDVRLEDSPLGGARFVITLPVRALPDSLFDVAQHVESTHADARRRSGTGTVVPLR >Mature_461_residues MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGAQRELALRELALHGREGFGFM SMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSVLHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDI RRLQDAARAFGAGMLSTRVKLSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG RMRERRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIADRGIALDVSTFDAPATHVCDP KLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDDDGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRR VAQVHGGDVRLEDSPLGGARFVITLPVRALPDSLFDVAQHVESTHADARRRSGTGTVVPLR
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=297, Percent_Identity=37.3737373737374, Blast_Score=181, Evalue=8e-47, Organism=Escherichia coli, GI1790346, Length=268, Percent_Identity=35.8208955223881, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1789808, Length=293, Percent_Identity=30.7167235494881, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=31.1355311355311, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=29.045643153527, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1786912, Length=242, Percent_Identity=31.404958677686, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788713, Length=305, Percent_Identity=24.9180327868852, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786783, Length=302, Percent_Identity=30.4635761589404, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=23.3333333333333, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=27.3913043478261, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI87082128, Length=296, Percent_Identity=27.3648648648649, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI87081816, Length=279, Percent_Identity=26.1648745519713, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=28.8990825688073, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790551, Length=274, Percent_Identity=27.3722627737226, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=23.8866396761134, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790861, Length=238, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1787374, Length=300, Percent_Identity=23.6666666666667, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=24.8908296943231, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789403, Length=236, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50959; Mature: 50959
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGA CCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHCCCC QRELALRELALHGREGFGFMSMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCE LHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDIRRLQDAARAFGAGMLSTRVK EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEE LSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCHHH RMRERRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHC RGIALDVSTFDAPATHVCDPKLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDD CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCEEEEEECC DGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQVHGGDVRLEDSPLGGAR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEE FVITLPVRALPDSLFDVAQHVESTHADARRRSGTGTVVPLR EEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MLRPLLRLYLVVILFVGASIIFIQLSFDRIFYERGAQAQRDSLTTYSFVLNDYLERHPGA CCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHCCCC QRELALRELALHGREGFGFMSMADARAQLSGAPLRDLDAGRIAISYNGKDYYMPLADGSV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCE LHARPIEAPDLDIRIYAYMLLALATLFAVVLWIHYHWRDIRRLQDAARAFGAGMLSTRVK EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEE LSGKSNIYELSQQFNDMAARIEASIKQQREMMHGISHELKTPLARLEFGLALLADADETG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCHHH RMRERRDALRRDVRELDELVTELLTIGRLEQGASELAPMEVVVDALIDSVAGNVADDIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHC RGIALDVSTFDAPATHVCDPKLVARALLNLIRNGARYASRKVVLAATRDPSGALVLSVDD CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCEEEEEECC DGPGIPAAERARVFEPFQRLDSSRDRQTGGFGLGLAIVRRVAQVHGGDVRLEDSPLGGAR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEE FVITLPVRALPDSLFDVAQHVESTHADARRRSGTGTVVPLR EEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]