Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689350
Identifier: 116689350
GI number: 116689350
Start: 1462354
End: 1463442
Strand: Reverse
Name: 116689350
Synonym: Bcen2424_1328
Alternate gene names: NA
Gene position: 1463442-1462354 (Counterclockwise)
Preceding gene: 116689351
Following gene: 116689349
Centisome position: 42.01
GC content: 68.41
Gene sequence:
>1089_bases ATGAACCGGCCCGCGCTTTTCCCGGCCGCACGCGCACGCGTGGCGGCCACCGCCCGGCTATGCCGCCTCTGGTGCGTCGC CTGCTGTGTCGCCGCGTGCGGCGTCGCGCTGCAGGCGAGTGCCGCCGAACTCCAGCTCAACGGACTCTACCAACGCCCCG ACGGCGCGATCACCGTGCGCCTGAACGGCGCCGGCATCGATCCTTATTTCGCGGCGAAGGCGCTGCTCGGCGCCGCCGAC GCCGGGCTCGACGCCCATCAGGCCGCGCTCGCCTGGATCGCGTGGCTGCTGCCGCGCCAGCGCCCGGACGGCGGGTTCGA TCGCTACTGCGTGAAGAGCGGCCAGTACAGCTCATGTGCCGAAGCCGACGCCGACGATGCAATGATGGCGACCTGGATCG AGCTGCTCGCCCGCTTCGCGCCGCCCGACGGCCTGCCCGCCGCATGGGAACTCAGCCTCGATCGCGCGGCCGCGCATCTG GACGCGCTGCTCAGCAAGCCCGCGGGTGTCTATCAGATCTCGTCGACGCTGCACGTCGCGCTGCTGATGGACAACGTCGA GGTCCACAGCGCGTTCCAGGCGCTCGCCGCGTATTACGTCCGGCATGGCGACGCCACGCGCGCCGGCCCGTGGAGCCAGC GCGCCGACCGGCTCGCGTCCGCGATCCTGAAGGTGTTCTGGCGCGGCACGCAGTCCGGCTTTCGCGCGAGCACGCAGCGC ATCAGCGACACGACGTTCTATCCGGCGAAAGTCGCGCAGGTCTTTCCGCTTCTTTCCGGTATTCAGGTTCCCCAGCAATC GAACGAGACGATCTACGCGCAGTGGATGCAGAAGTACGGCAAGACCTGGCTGCAACTCGCCAGCTCCGACTATCCGTGGG GCTTGATCGCACTGGTCGCATTCAAGATGAACGACATGAACACGGTCGCGTGCTGGCATGCACGATCGGGGCCGTACCGG CACGGCGCGCACTGGAACGTACTGGAGGAGGCGCTTTACCTGGCATTCGAAAGCCGGATGGCCGACCCGGTCGCACCCGC TCGATGCGGCTTCACGACGGCGGCGACAACGGAGACCGCGTCACGCTGA
Upstream 100 bases:
>100_bases TGCACTGAGCCGCGACATCGACACACCCGTCGGCGCGCGGCGCGGCCAACGCCGCGCGCGGCGGGATTTGCGCAGGACCA TCGCGCAGGAGCCCCCCATC
Downstream 100 bases:
>100_bases CCCACGCGTGCGCACGGTCCGGGGAAATCTACAGGGAAGGAGACGTGTCATGTGTGGCATCGTCGGCGCGGTCGCGCAAC GGGATATCGTCCCGATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MNRPALFPAARARVAATARLCRLWCVACCVAACGVALQASAAELQLNGLYQRPDGAITVRLNGAGIDPYFAAKALLGAAD AGLDAHQAALAWIAWLLPRQRPDGGFDRYCVKSGQYSSCAEADADDAMMATWIELLARFAPPDGLPAAWELSLDRAAAHL DALLSKPAGVYQISSTLHVALLMDNVEVHSAFQALAAYYVRHGDATRAGPWSQRADRLASAILKVFWRGTQSGFRASTQR ISDTTFYPAKVAQVFPLLSGIQVPQQSNETIYAQWMQKYGKTWLQLASSDYPWGLIALVAFKMNDMNTVACWHARSGPYR HGAHWNVLEEALYLAFESRMADPVAPARCGFTTAATTETASR
Sequences:
>Translated_362_residues MNRPALFPAARARVAATARLCRLWCVACCVAACGVALQASAAELQLNGLYQRPDGAITVRLNGAGIDPYFAAKALLGAAD AGLDAHQAALAWIAWLLPRQRPDGGFDRYCVKSGQYSSCAEADADDAMMATWIELLARFAPPDGLPAAWELSLDRAAAHL DALLSKPAGVYQISSTLHVALLMDNVEVHSAFQALAAYYVRHGDATRAGPWSQRADRLASAILKVFWRGTQSGFRASTQR ISDTTFYPAKVAQVFPLLSGIQVPQQSNETIYAQWMQKYGKTWLQLASSDYPWGLIALVAFKMNDMNTVACWHARSGPYR HGAHWNVLEEALYLAFESRMADPVAPARCGFTTAATTETASR >Mature_362_residues MNRPALFPAARARVAATARLCRLWCVACCVAACGVALQASAAELQLNGLYQRPDGAITVRLNGAGIDPYFAAKALLGAAD AGLDAHQAALAWIAWLLPRQRPDGGFDRYCVKSGQYSSCAEADADDAMMATWIELLARFAPPDGLPAAWELSLDRAAAHL DALLSKPAGVYQISSTLHVALLMDNVEVHSAFQALAAYYVRHGDATRAGPWSQRADRLASAILKVFWRGTQSGFRASTQR ISDTTFYPAKVAQVFPLLSGIQVPQQSNETIYAQWMQKYGKTWLQLASSDYPWGLIALVAFKMNDMNTVACWHARSGPYR HGAHWNVLEEALYLAFESRMADPVAPARCGFTTAATTETASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39343; Mature: 39343
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPALFPAARARVAATARLCRLWCVACCVAACGVALQASAAELQLNGLYQRPDGAITVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHEEECCCEECCCCEEEEE LNGAGIDPYFAAKALLGAADAGLDAHQAALAWIAWLLPRQRPDGGFDRYCVKSGQYSSCA ECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC EADADDAMMATWIELLARFAPPDGLPAAWELSLDRAAAHLDALLSKPAGVYQISSTLHVA CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEHHHEEEE LLMDNVEVHSAFQALAAYYVRHGDATRAGPWSQRADRLASAILKVFWRGTQSGFRASTQR EEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ISDTTFYPAKVAQVFPLLSGIQVPQQSNETIYAQWMQKYGKTWLQLASSDYPWGLIALVA HCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FKMNDMNTVACWHARSGPYRHGAHWNVLEEALYLAFESRMADPVAPARCGFTTAATTETA HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SR CC >Mature Secondary Structure MNRPALFPAARARVAATARLCRLWCVACCVAACGVALQASAAELQLNGLYQRPDGAITVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHEEECCCEECCCCEEEEE LNGAGIDPYFAAKALLGAADAGLDAHQAALAWIAWLLPRQRPDGGFDRYCVKSGQYSSCA ECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC EADADDAMMATWIELLARFAPPDGLPAAWELSLDRAAAHLDALLSKPAGVYQISSTLHVA CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEHHHEEEE LLMDNVEVHSAFQALAAYYVRHGDATRAGPWSQRADRLASAILKVFWRGTQSGFRASTQR EEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ISDTTFYPAKVAQVFPLLSGIQVPQQSNETIYAQWMQKYGKTWLQLASSDYPWGLIALVA HCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FKMNDMNTVACWHARSGPYRHGAHWNVLEEALYLAFESRMADPVAPARCGFTTAATTETA HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA