Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is icc [H]
Identifier: 116689252
GI number: 116689252
Start: 1360538
End: 1361362
Strand: Reverse
Name: icc [H]
Synonym: Bcen2424_1230
Alternate gene names: 116689252
Gene position: 1361362-1360538 (Counterclockwise)
Preceding gene: 116689253
Following gene: 116689251
Centisome position: 39.08
GC content: 70.18
Gene sequence:
>825_bases ATGCTGCTTGCTCAAATCAGCGATCTCCACATCAAGCGGCCGGGCCAGCTCGCGTACCGGCGCGTCGACACGGCGGCCGC GCTCGCGCGCTGCGTCGCGAAGCTGAACGCACTCGTGCCGCGCCCCGACGCCGTGCTCGTCACCGGCGACCTGACCGACT TCGGCCACGATGAAGAGTACGGCAACCTGCGCGGGCTGCTCGCGGCGCTCGAGATTCCGTATTACCTGATGATCGGCAAT CACGACGACCGCGCCGGATTGCGCCGCGCGTTCGCCGATCGCGCCGAGTTGCAGGACGGCGAATTCGTGCAGTACGCGCT CGACGTCGGCGCGGTGCGCGTACTCGCGCTCGATTCGCAGGTGCCGGGCGCGAGCCACGGCGACCTGTGCGACGCCCGGC TCGCGTGGCTTGCCGCGCAGCTCGACGCCGCGCGCGACCGCCCGGTGATCGTCGCGCTGCATCACCCGCCGTTCGTGTCG GGCATTGGCCACATGGACAAGCTGCGTCTCGCGCCCGCCGCCGCCGCGAAACTCGATGCGCTGCTGCGCGGCCATCCGAA CGTCGAGCGCGTGCTGTGCGGTCACGTGCACCGCACGATGTTCACCCGCTTCGGCGGCACGCTCGCGGCTGCGGTGCCGT CGCCCGCGCACCAGGTCGCGTTCGACCTGCGGACCGATGCGCCGTCCGCATTCCGGCTCGAACCGCCGGCGTTCGCGGTC CATCACCATGCGCCCGATACGGGAATGACGTCGCATCACGTCTATGTGGACGAAGGCGCGGGGCCGTATCCGTTCTACGA GCCGACGGGCGAGCTGGTCGACTGA
Upstream 100 bases:
>100_bases ATCGCGCTCGGCGCGTAAGCCGTCGATCGGGCATCATCCAGGCAGCCCCCATGGCGGCGCACGCCGCCGCGACAACAACC AGAGATTCCGAGGAACGACG
Downstream 100 bases:
>100_bases CGATGTGGCGCGCGTGCCGTGACGACCGGCGGCCGGCTGGTTGTCCGGTTATGCCGGTTATGCCGGCTCGCCGCCGGCAG GATTCACGTCGCTCCGGTAT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLLAQISDLHIKRPGQLAYRRVDTAAALARCVAKLNALVPRPDAVLVTGDLTDFGHDEEYGNLRGLLAALEIPYYLMIGN HDDRAGLRRAFADRAELQDGEFVQYALDVGAVRVLALDSQVPGASHGDLCDARLAWLAAQLDAARDRPVIVALHHPPFVS GIGHMDKLRLAPAAAAKLDALLRGHPNVERVLCGHVHRTMFTRFGGTLAAAVPSPAHQVAFDLRTDAPSAFRLEPPAFAV HHHAPDTGMTSHHVYVDEGAGPYPFYEPTGELVD
Sequences:
>Translated_274_residues MLLAQISDLHIKRPGQLAYRRVDTAAALARCVAKLNALVPRPDAVLVTGDLTDFGHDEEYGNLRGLLAALEIPYYLMIGN HDDRAGLRRAFADRAELQDGEFVQYALDVGAVRVLALDSQVPGASHGDLCDARLAWLAAQLDAARDRPVIVALHHPPFVS GIGHMDKLRLAPAAAAKLDALLRGHPNVERVLCGHVHRTMFTRFGGTLAAAVPSPAHQVAFDLRTDAPSAFRLEPPAFAV HHHAPDTGMTSHHVYVDEGAGPYPFYEPTGELVD >Mature_274_residues MLLAQISDLHIKRPGQLAYRRVDTAAALARCVAKLNALVPRPDAVLVTGDLTDFGHDEEYGNLRGLLAALEIPYYLMIGN HDDRAGLRRAFADRAELQDGEFVQYALDVGAVRVLALDSQVPGASHGDLCDARLAWLAAQLDAARDRPVIVALHHPPFVS GIGHMDKLRLAPAAAAKLDALLRGHPNVERVLCGHVHRTMFTRFGGTLAAAVPSPAHQVAFDLRTDAPSAFRLEPPAFAV HHHAPDTGMTSHHVYVDEGAGPYPFYEPTGELVD
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
Organism=Escherichia coli, GI1789410, Length=240, Percent_Identity=30.4166666666667, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 29653; Mature: 29653
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAQISDLHIKRPGQLAYRRVDTAAALARCVAKLNALVPRPDAVLVTGDLTDFGHDEEY CCEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH GNLRGLLAALEIPYYLMIGNHDDRAGLRRAFADRAELQDGEFVQYALDVGAVRVLALDSQ HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHCEEEEEEECCC VPGASHGDLCDARLAWLAAQLDAARDRPVIVALHHPPFVSGIGHMDKLRLAPAAAAKLDA CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHCCHHHHHHHHH LLRGHPNVERVLCGHVHRTMFTRFGGTLAAAVPSPAHQVAFDLRTDAPSAFRLEPPAFAV HHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHEEEEECCCCCCCEEECCCCEEE HHHAPDTGMTSHHVYVDEGAGPYPFYEPTGELVD EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLAQISDLHIKRPGQLAYRRVDTAAALARCVAKLNALVPRPDAVLVTGDLTDFGHDEEY CCEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCH GNLRGLLAALEIPYYLMIGNHDDRAGLRRAFADRAELQDGEFVQYALDVGAVRVLALDSQ HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHCEEEEEEECCC VPGASHGDLCDARLAWLAAQLDAARDRPVIVALHHPPFVSGIGHMDKLRLAPAAAAKLDA CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHCCHHHHHHHHH LLRGHPNVERVLCGHVHRTMFTRFGGTLAAAVPSPAHQVAFDLRTDAPSAFRLEPPAFAV HHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHEEEEECCCCCCCEEECCCCEEE HHHAPDTGMTSHHVYVDEGAGPYPFYEPTGELVD EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]