Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689241
Identifier: 116689241
GI number: 116689241
Start: 1349987
End: 1350391
Strand: Reverse
Name: 116689241
Synonym: Bcen2424_1219
Alternate gene names: NA
Gene position: 1350391-1349987 (Counterclockwise)
Preceding gene: 116689242
Following gene: 116689240
Centisome position: 38.76
GC content: 69.63
Gene sequence:
>405_bases ATGACGCGCGGGCATTCGCCTCATTCGTCTGACGGCGGCGGCGGCCGCCGGGATTTCCCGCATCGGCCTGCGCGTTGCGC CGCGGCGACGCACGGTCATGCCGAGGCTCTGTCGCGAGATTGTCATCTGCTGGCTGCGGCGCGCTTCGTTTCGCGACGGT CATGCACCGTACGCATGCACGCGGCGCCCGTCGCCGCGCCGCCGGGCACGGGCTGGAATCGCGGTGTACCGTTTGCGTCT GGAGTTACCCTGATACGCGCGCCGCGGCAATCCCGTTACACTCGGAAAACTCATCCGCAGAAGGCGGTCTCGATGCTCCA CGTTCTTTTGCGTCCGCCTGCGCATGCGGCTGCATCGGCGTGGCGATGCGCCGCCGCCCCGCCGCCCGCTGCCGGGCACC GTTGA
Upstream 100 bases:
>100_bases GCGCGGAGCGCACGAACTGCGGCCGGTCGCCCGTCGCCCGTCGTGCGGCAATGCCGGTGACGACGCGACGCGGGTCTGCC GACGGGCCGCGGATCGCATC
Downstream 100 bases:
>100_bases CATGAAGTCCACCCGCGACCTGTCGCTCGACGCCCTGCTCGAACGCCTCACGCCGACGCCTCAGGGCTGGCTCGCCACCT ATCGCACCACGACCTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTRGHSPHSSDGGGGRRDFPHRPARCAAATHGHAEALSRDCHLLAAARFVSRRSCTVRMHAAPVAAPPGTGWNRGVPFAS GVTLIRAPRQSRYTRKTHPQKAVSMLHVLLRPPAHAAASAWRCAAAPPPAAGHR
Sequences:
>Translated_134_residues MTRGHSPHSSDGGGGRRDFPHRPARCAAATHGHAEALSRDCHLLAAARFVSRRSCTVRMHAAPVAAPPGTGWNRGVPFAS GVTLIRAPRQSRYTRKTHPQKAVSMLHVLLRPPAHAAASAWRCAAAPPPAAGHR >Mature_133_residues TRGHSPHSSDGGGGRRDFPHRPARCAAATHGHAEALSRDCHLLAAARFVSRRSCTVRMHAAPVAAPPGTGWNRGVPFASG VTLIRAPRQSRYTRKTHPQKAVSMLHVLLRPPAHAAASAWRCAAAPPPAAGHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14235; Mature: 14104
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGHSPHSSDGGGGRRDFPHRPARCAAATHGHAEALSRDCHLLAAARFVSRRSCTVRMH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEC AAPVAAPPGTGWNRGVPFASGVTLIRAPRQSRYTRKTHPQKAVSMLHVLLRPPAHAAASA CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH WRCAAAPPPAAGHR CCCCCCCCCCCCCC >Mature Secondary Structure TRGHSPHSSDGGGGRRDFPHRPARCAAATHGHAEALSRDCHLLAAARFVSRRSCTVRMH CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEC AAPVAAPPGTGWNRGVPFASGVTLIRAPRQSRYTRKTHPQKAVSMLHVLLRPPAHAAASA CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHH WRCAAAPPPAAGHR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA