Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116624467
Identifier: 116624467
GI number: 116624467
Start: 6751964
End: 6752356
Strand: Reverse
Name: 116624467
Synonym: Acid_5389
Alternate gene names: NA
Gene position: 6752356-6751964 (Counterclockwise)
Preceding gene: 116624468
Following gene: 116624462
Centisome position: 67.76
GC content: 68.7
Gene sequence:
>393_bases ATGGCAGCAGGCGACGCGCAAAGAGTCTGGTTTCCCGAGATGATCGAAGTGTTGCGTGAGGAGTGGCGCCCGGAGATGCC GTTCGACGCGCTGGTTGCGCTGCGCGACAGCCTGGACGCAATGCTGCAGCAGATCCGCGCGGAGCGCCACATTCGCCCGC CGGTGCTGCGGTGCCCGGAGTGCGGCAAGATGGCGGAGGCGGCGGAGGCGCACGTCAGCGTGCGCGCGTTGATCCTATCG CTACTGCGGCACGAGATCGCCGCGCCGGAATCGACCTATGCGCTCGAGAAGAGCTGGGCGCGGCACCGGAAGCAGAACGG GCTCGATCCTTACGGGAAGGCGATCGACCCGGCCGCAGAGGCCGCGGGCTGCGGGCACCGGGGAAAGCGCTAG
Upstream 100 bases:
>100_bases GTGCATCATGGGACGGCTGGACTGGGTGGCGGACGTGCTGATACACGTCGAGCCGGCGCCGGACGGGCACAAAGCGTAAT GGACTTACAATAGGTCACAC
Downstream 100 bases:
>100_bases GAAGTCAAGGCCTGTCTCGCAAAGGCGCAAAGGACGCAAAGAAAACCTACGTGCGGGCGCTGTAATCGACGAAGCCCTGA TTGATGTTGCTGATGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAAGDAQRVWFPEMIEVLREEWRPEMPFDALVALRDSLDAMLQQIRAERHIRPPVLRCPECGKMAEAAEAHVSVRALILS LLRHEIAAPESTYALEKSWARHRKQNGLDPYGKAIDPAAEAAGCGHRGKR
Sequences:
>Translated_130_residues MAAGDAQRVWFPEMIEVLREEWRPEMPFDALVALRDSLDAMLQQIRAERHIRPPVLRCPECGKMAEAAEAHVSVRALILS LLRHEIAAPESTYALEKSWARHRKQNGLDPYGKAIDPAAEAAGCGHRGKR >Mature_129_residues AAGDAQRVWFPEMIEVLREEWRPEMPFDALVALRDSLDAMLQQIRAERHIRPPVLRCPECGKMAEAAEAHVSVRALILSL LRHEIAAPESTYALEKSWARHRKQNGLDPYGKAIDPAAEAAGCGHRGKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14606; Mature: 14475
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGDAQRVWFPEMIEVLREEWRPEMPFDALVALRDSLDAMLQQIRAERHIRPPVLRCPE CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC CGKMAEAAEAHVSVRALILSLLRHEIAAPESTYALEKSWARHRKQNGLDPYGKAIDPAAE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHH AAGCGHRGKR HHCCCCCCCC >Mature Secondary Structure AAGDAQRVWFPEMIEVLREEWRPEMPFDALVALRDSLDAMLQQIRAERHIRPPVLRCPE CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC CGKMAEAAEAHVSVRALILSLLRHEIAAPESTYALEKSWARHRKQNGLDPYGKAIDPAAE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHH AAGCGHRGKR HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA