Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624400
Identifier: 116624400
GI number: 116624400
Start: 6670131
End: 6671123
Strand: Reverse
Name: 116624400
Synonym: Acid_5322
Alternate gene names: NA
Gene position: 6671123-6670131 (Counterclockwise)
Preceding gene: 116624401
Following gene: 116624399
Centisome position: 66.94
GC content: 66.36
Gene sequence:
>993_bases ATGCGCCTGATTCAACTTCATGGCCCCGAAGGCCGCCGGGTCGGCATCGTGGATGGTGACTTCATCCGCCTTTTGAACGA AGCCCGGTCTATCTACGCGCTCGCGCGCTCGGCCGTTTCCGCCGGCACTCCGCTGGCAAAAGCCGCAGACGCGGACGCAG GGATCGAAGTGGCCAGTTACGATGAGATCTACAGCGGCCGGTCGAGGTGGCGCATCCTGCCGTGCATCGATCATCCCCTT GAGTCCGCGCGCTGCATGGTGAGCGGCACCGGGCTGAGTCACATGCGCAGCGCGGACAACCGGCAGGCGATGCACGCGGC GGGCGAGCAGGTCACCGATAGTATGCGCATGTACCAGTCGGGCGTGGAAGGCGGACGCCCCGCGCCGGGCCAGGTGGGCG TGTCGCCGGAGTGGTTCTACAAGGGCACCGGCGCCATCCTGCGCGCGCATGGCGAGCCGCTCGATATTCCCGTCTACGCC GAGGATGGCGGTGAGGAGCCGGAGATTGCGGGCATCTACCTGATCGACCAGGCGGGCGCGCCGCGTCGCATCGGCATGGC GGCCGGCAACGAATTCTCCGACCACCTCTTCGAGAAGAAGAACTACCTGTATCTCGCGTCCTCGAAGCTGCGGACCTGCG CGATCGGCCCCGAACTCGTGAGCGCGCCGGAGTTCGACCTGGTGCGCGGCGAAGTCGCGATCGAGCGCGGCGGCGCCGTG ATCTGGCGCAAGGCCATTCAGAGCGGCGAGCGCGCCATGTGCCACAGCCTCGCCAACATGGAGCACCACCACTTCAAGTT CGAAGCCCACCGCAGGCCCGGCGATGTGCACATTCACTTCTTCGGCGCCGACGCCTTCAGCTTCGGCGAAGGCATCCGGC TCGCCGATGGCGATATCATGCAGGTGCAATGGGATGGCTTCGGACGTCCGCTGCGCAACCCGGTCCGCGTGATCGCGGGC TCCGAAACTCCGGTCGTGGTGAAGGACATCTGA
Upstream 100 bases:
>100_bases CGATGGATGGCTATATCGATTTGCGTGACGACGTTCCCGGGCTGGGGCTGACTATCAAGGAAGACGCGCTCGGCCAGTTT GCGATCATCGAATAATCGCT
Downstream 100 bases:
>100_bases TGCGATCGCTGCTGCTGGGACTGCTGCTGGCGGCCTCCGAGCGCTCCGCGTTGCTCAATCCCGAGGACTTCCGGCCCGAT CGCGAGCTCGTTGCGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MRLIQLHGPEGRRVGIVDGDFIRLLNEARSIYALARSAVSAGTPLAKAADADAGIEVASYDEIYSGRSRWRILPCIDHPL ESARCMVSGTGLSHMRSADNRQAMHAAGEQVTDSMRMYQSGVEGGRPAPGQVGVSPEWFYKGTGAILRAHGEPLDIPVYA EDGGEEPEIAGIYLIDQAGAPRRIGMAAGNEFSDHLFEKKNYLYLASSKLRTCAIGPELVSAPEFDLVRGEVAIERGGAV IWRKAIQSGERAMCHSLANMEHHHFKFEAHRRPGDVHIHFFGADAFSFGEGIRLADGDIMQVQWDGFGRPLRNPVRVIAG SETPVVVKDI
Sequences:
>Translated_330_residues MRLIQLHGPEGRRVGIVDGDFIRLLNEARSIYALARSAVSAGTPLAKAADADAGIEVASYDEIYSGRSRWRILPCIDHPL ESARCMVSGTGLSHMRSADNRQAMHAAGEQVTDSMRMYQSGVEGGRPAPGQVGVSPEWFYKGTGAILRAHGEPLDIPVYA EDGGEEPEIAGIYLIDQAGAPRRIGMAAGNEFSDHLFEKKNYLYLASSKLRTCAIGPELVSAPEFDLVRGEVAIERGGAV IWRKAIQSGERAMCHSLANMEHHHFKFEAHRRPGDVHIHFFGADAFSFGEGIRLADGDIMQVQWDGFGRPLRNPVRVIAG SETPVVVKDI >Mature_330_residues MRLIQLHGPEGRRVGIVDGDFIRLLNEARSIYALARSAVSAGTPLAKAADADAGIEVASYDEIYSGRSRWRILPCIDHPL ESARCMVSGTGLSHMRSADNRQAMHAAGEQVTDSMRMYQSGVEGGRPAPGQVGVSPEWFYKGTGAILRAHGEPLDIPVYA EDGGEEPEIAGIYLIDQAGAPRRIGMAAGNEFSDHLFEKKNYLYLASSKLRTCAIGPELVSAPEFDLVRGEVAIERGGAV IWRKAIQSGERAMCHSLANMEHHHFKFEAHRRPGDVHIHFFGADAFSFGEGIRLADGDIMQVQWDGFGRPLRNPVRVIAG SETPVVVKDI
Specific function: Unknown
COG id: COG3802
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35986; Mature: 35986
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIQLHGPEGRRVGIVDGDFIRLLNEARSIYALARSAVSAGTPLAKAADADAGIEVASY CEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECH DEIYSGRSRWRILPCIDHPLESARCMVSGTGLSHMRSADNRQAMHAAGEQVTDSMRMYQS HHHHCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GVEGGRPAPGQVGVSPEWFYKGTGAILRAHGEPLDIPVYAEDGGEEPEIAGIYLIDQAGA CCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCC PRRIGMAAGNEFSDHLFEKKNYLYLASSKLRTCAIGPELVSAPEFDLVRGEVAIERGGAV CCEEEECCCCCHHHHHHCCCCEEEEECCCCEEEECCHHHHCCCCCCEEECEEEEECCCHH IWRKAIQSGERAMCHSLANMEHHHFKFEAHRRPGDVHIHFFGADAFSFGEGIRLADGDIM EEHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCHHHCCCCEEEECCCEE QVQWDGFGRPLRNPVRVIAGSETPVVVKDI EEEECCCCCCCCCCEEEEECCCCCEEEECC >Mature Secondary Structure MRLIQLHGPEGRRVGIVDGDFIRLLNEARSIYALARSAVSAGTPLAKAADADAGIEVASY CEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECH DEIYSGRSRWRILPCIDHPLESARCMVSGTGLSHMRSADNRQAMHAAGEQVTDSMRMYQS HHHHCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GVEGGRPAPGQVGVSPEWFYKGTGAILRAHGEPLDIPVYAEDGGEEPEIAGIYLIDQAGA CCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCC PRRIGMAAGNEFSDHLFEKKNYLYLASSKLRTCAIGPELVSAPEFDLVRGEVAIERGGAV CCEEEECCCCCHHHHHHCCCCEEEEECCCCEEEECCHHHHCCCCCCEEECEEEEECCCHH IWRKAIQSGERAMCHSLANMEHHHFKFEAHRRPGDVHIHFFGADAFSFGEGIRLADGDIM EEHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCHHHCCCCEEEECCCEE QVQWDGFGRPLRNPVRVIAGSETPVVVKDI EEEECCCCCCCCCCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA