Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is malQ [H]
Identifier: 116624396
GI number: 116624396
Start: 6664325
End: 6666547
Strand: Reverse
Name: malQ [H]
Synonym: Acid_5317
Alternate gene names: 116624396
Gene position: 6666547-6664325 (Counterclockwise)
Preceding gene: 116624398
Following gene: 116624395
Centisome position: 66.9
GC content: 63.97
Gene sequence:
>2223_bases TTGCCCACCGACACATTCGAGCAACTCCTGGACCGAGCCGCTTCCTGGTACGGAATCGACGACGGCTTTTGGGATATCTT CGGCAATCACCACACGACCTCGGTGGCAGCCAAACAATCCATTCTGCGCGCGCTTGGGGTCGCGGTGGATTCGGCGGAGG ATCTGCAACGGTCGCTGGCCTCACTGGCGCGGCACGAGTGGGAGCGACTGCTGCCGCCGGCCGTGGTCGCGACCGCGGGC GCGCCGGTGGAACTGGTGGTGAACGTGGCCGCCGAATCGCTGGGCGAGCGCGCGCGCTTCACTATCGCGCGTGAGACCGG CGAAATCAGCGAGTACGAACTCAACCTGTGGGATCTGCCGCACGTTGGGTCGGCCGGCTTGAACGGCAGCACCTGGGTGC AGAAGCAGGCGGTCCTGCCGCTGGAACTTCCGCTCGGGTACCACGAGATCACGCTGAAAGTGGGCGCATCCAGCGCGCGC ACGCGATACATCGTCACCCCGGACCGCGCCTGGACGGACCCGAACCTCGGCCGCGGCGGACGTGCCGCCGGGATCGCGGT CAGCCTGTATGGCGTGCGCTCGGAGCGCAACTGGGGCTGCGGCGATTTCCGCGATCTCGGTGAAGTGATCGACTGGGTGG CGCAGGAACTGGGCGCGAGTTTCGTGGCGCTGAACCCGCTGCACGCGATCCACAATCGCAGGCCATTCAATACCAGCCCT TACCTGCCGAACAGCATCTTCTACCAGAACTACCTCTACCTGGACATCGAAGGCATGGAGGATTTCGCGAACTGCAGGCG AGCGGTCGCCCTGCGCGCATCAAATGATATCTCGAACGAGATCGAAGTGCTGCGCGCCACGCCATTCGTGGAATACGAAC GCGTCAGCGCGCTCAAGATGCGCTTCCTGAAGCTCGCCTTCGTGCAGTTTCTGCGCGAGTGGCGCACCGGCTCCCCGCGC GCGCGAGCCTTCGACTCTTTCCGCGAACGCGAAGGCGATCTGCTCGAGAAGTTTGCCACCTACTGTGCGCTGGACGAGCA TCTGCACCGCCGGAATCCCGACCTGTGGGTATGGACCGATTGGCCGGCGCATTACCAGGATCCCTGTTCCGCGGAGACCG TGGAGTTCCGCCGCAGGCACTGGCGCAGCGTAGTCTTTTACGAATACCTGCAATGGCAGCTCGATCTGCAACTGGGGCGC GCGCAGCAGCACGCGCGCAACCGGCGGCTTTCGATCGGACTGTACCACGATCTCGCTCTGGCCACGGACCGTTTCGGCAG CGACCTGTGGGCGCACCGTCCGTTCTACGTGGCGGGGTGCCGCGTCGGTTCGCCGCCCGACGATTTCTCGCCGAAAGGGC AGGACTGGGCATTTCCTCCGCCGAACGCTGCCGCGCATCGTGAGGACGGCTACCGCCTCTTCGCCGAATCGATTCGCAAA AACTGCCGCCATGGCGGCGCGCTGCGCATCGATCACGTGATGCGCCTCTTCCGCCTCTTCTGGATTCCCGATGGAGTGGA CGCCGCGCAGGGCGCATACGTGCGCGAACGCAGTCAGGATTTCGTCCGCATCCTGGCGCTCGAGAGCGTGCGCAATCAGG TGATCGTTGTGGGTGAAGACCTGGGAACCGTGGAGCCGTCCATCCGCGAGACGCTGGCACGCTTCGGAATCCTGAGCTAC CGTCTGTTCTACTTCGAGAAAAACGAACGCGGCGAGTTTCGCCGCAGCGACGAGTATCCGCTGCAGGCGCTGGTCTCCTC CACCACGCACGACCTGCCGACGTTGGCCGGATTCTGGGTGGGCGCGGATATCGAAGCGCGCCGCGGCGCCAACATTATCG ACGACGCAACCCGGCGTGAGCAGTTCGAGCATCGCGAGCGCGAGAAGCAGAAGATGCTGGACGTGCTGTTCCAGCTGCAT CTTCTGCCCGAAAGCCTGCCGCGGGTGGCGGGCGCTTATTTGGAATTGACCGGCGAGTTGCACAACGCGATCGTCGGCTT CCTGGCGATGACGCCTTCGCAGTTGCTCGCCATCAATCAAGAGGACCTTACCAAGGAGCCTCATCAGCAGAACCTTCCCG GCAGCACGTGGCAGTATCCGAACTGGGGACGCAAGATGCGCTTCACGATCGAACAGTTGTGCGGCGACCCGGAGACGCGC GGCTACACGGTGATGTTCCGCGACTGGATCGAACGGTCGGGACGGAAGAACCAGAGGTACTAG
Upstream 100 bases:
>100_bases CGTCTACGCGCGTAAACAGCTCCGCGGGACCGCTGCTGGCCATGGGTTTTTCCATATCTTCATTTTCGCATGAGCGGCAG TAGTCCTGTAAAATCAAAGA
Downstream 100 bases:
>100_bases GGCGCGTTGTAAAATGGGCTCTGCATGCGCTTTTCCGTAGTCCTGGTCCCGGCATTCGTACTCCTTGCGGGCACGGGCTT CTTCCTCATCAGGCCGAAGT
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MPTDTFEQLLDRAASWYGIDDGFWDIFGNHHTTSVAAKQSILRALGVAVDSAEDLQRSLASLARHEWERLLPPAVVATAG APVELVVNVAAESLGERARFTIARETGEISEYELNLWDLPHVGSAGLNGSTWVQKQAVLPLELPLGYHEITLKVGASSAR TRYIVTPDRAWTDPNLGRGGRAAGIAVSLYGVRSERNWGCGDFRDLGEVIDWVAQELGASFVALNPLHAIHNRRPFNTSP YLPNSIFYQNYLYLDIEGMEDFANCRRAVALRASNDISNEIEVLRATPFVEYERVSALKMRFLKLAFVQFLREWRTGSPR ARAFDSFREREGDLLEKFATYCALDEHLHRRNPDLWVWTDWPAHYQDPCSAETVEFRRRHWRSVVFYEYLQWQLDLQLGR AQQHARNRRLSIGLYHDLALATDRFGSDLWAHRPFYVAGCRVGSPPDDFSPKGQDWAFPPPNAAAHREDGYRLFAESIRK NCRHGGALRIDHVMRLFRLFWIPDGVDAAQGAYVRERSQDFVRILALESVRNQVIVVGEDLGTVEPSIRETLARFGILSY RLFYFEKNERGEFRRSDEYPLQALVSSTTHDLPTLAGFWVGADIEARRGANIIDDATRREQFEHREREKQKMLDVLFQLH LLPESLPRVAGAYLELTGELHNAIVGFLAMTPSQLLAINQEDLTKEPHQQNLPGSTWQYPNWGRKMRFTIEQLCGDPETR GYTVMFRDWIERSGRKNQRY
Sequences:
>Translated_740_residues MPTDTFEQLLDRAASWYGIDDGFWDIFGNHHTTSVAAKQSILRALGVAVDSAEDLQRSLASLARHEWERLLPPAVVATAG APVELVVNVAAESLGERARFTIARETGEISEYELNLWDLPHVGSAGLNGSTWVQKQAVLPLELPLGYHEITLKVGASSAR TRYIVTPDRAWTDPNLGRGGRAAGIAVSLYGVRSERNWGCGDFRDLGEVIDWVAQELGASFVALNPLHAIHNRRPFNTSP YLPNSIFYQNYLYLDIEGMEDFANCRRAVALRASNDISNEIEVLRATPFVEYERVSALKMRFLKLAFVQFLREWRTGSPR ARAFDSFREREGDLLEKFATYCALDEHLHRRNPDLWVWTDWPAHYQDPCSAETVEFRRRHWRSVVFYEYLQWQLDLQLGR AQQHARNRRLSIGLYHDLALATDRFGSDLWAHRPFYVAGCRVGSPPDDFSPKGQDWAFPPPNAAAHREDGYRLFAESIRK NCRHGGALRIDHVMRLFRLFWIPDGVDAAQGAYVRERSQDFVRILALESVRNQVIVVGEDLGTVEPSIRETLARFGILSY RLFYFEKNERGEFRRSDEYPLQALVSSTTHDLPTLAGFWVGADIEARRGANIIDDATRREQFEHREREKQKMLDVLFQLH LLPESLPRVAGAYLELTGELHNAIVGFLAMTPSQLLAINQEDLTKEPHQQNLPGSTWQYPNWGRKMRFTIEQLCGDPETR GYTVMFRDWIERSGRKNQRY >Mature_739_residues PTDTFEQLLDRAASWYGIDDGFWDIFGNHHTTSVAAKQSILRALGVAVDSAEDLQRSLASLARHEWERLLPPAVVATAGA PVELVVNVAAESLGERARFTIARETGEISEYELNLWDLPHVGSAGLNGSTWVQKQAVLPLELPLGYHEITLKVGASSART RYIVTPDRAWTDPNLGRGGRAAGIAVSLYGVRSERNWGCGDFRDLGEVIDWVAQELGASFVALNPLHAIHNRRPFNTSPY LPNSIFYQNYLYLDIEGMEDFANCRRAVALRASNDISNEIEVLRATPFVEYERVSALKMRFLKLAFVQFLREWRTGSPRA RAFDSFREREGDLLEKFATYCALDEHLHRRNPDLWVWTDWPAHYQDPCSAETVEFRRRHWRSVVFYEYLQWQLDLQLGRA QQHARNRRLSIGLYHDLALATDRFGSDLWAHRPFYVAGCRVGSPPDDFSPKGQDWAFPPPNAAAHREDGYRLFAESIRKN CRHGGALRIDHVMRLFRLFWIPDGVDAAQGAYVRERSQDFVRILALESVRNQVIVVGEDLGTVEPSIRETLARFGILSYR LFYFEKNERGEFRRSDEYPLQALVSSTTHDLPTLAGFWVGADIEARRGANIIDDATRREQFEHREREKQKMLDVLFQLHL LPESLPRVAGAYLELTGELHNAIVGFLAMTPSQLLAINQEDLTKEPHQQNLPGSTWQYPNWGRKMRFTIEQLCGDPETRG YTVMFRDWIERSGRKNQRY
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=708, Percent_Identity=33.4745762711864, Blast_Score=371, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 84778; Mature: 84647
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDTFEQLLDRAASWYGIDDGFWDIFGNHHTTSVAAKQSILRALGVAVDSAEDLQRSLA CCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SLARHEWERLLPPAVVATAGAPVELVVNVAAESLGERARFTIARETGEISEYELNLWDLP HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCEEEEEEECCC HVGSAGLNGSTWVQKQAVLPLELPLGYHEITLKVGASSARTRYIVTPDRAWTDPNLGRGG CCCCCCCCCCHHHHHHCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCC RAAGIAVSLYGVRSERNWGCGDFRDLGEVIDWVAQELGASFVALNPLHAIHNRRPFNTSP CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCC YLPNSIFYQNYLYLDIEGMEDFANCRRAVALRASNDISNEIEVLRATPFVEYERVSALKM CCCCCEEECCEEEEEECCCHHHHHHHHHHHEECCCCCCHHHHHHCCCCCHHHHHHHHHHH RFLKLAFVQFLREWRTGSPRARAFDSFREREGDLLEKFATYCALDEHLHRRNPDLWVWTD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC WPAHYQDPCSAETVEFRRRHWRSVVFYEYLQWQLDLQLGRAQQHARNRRLSIGLYHDLAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH ATDRFGSDLWAHRPFYVAGCRVGSPPDDFSPKGQDWAFPPPNAAAHREDGYRLFAESIRK HHHHHCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NCRHGGALRIDHVMRLFRLFWIPDGVDAAQGAYVRERSQDFVRILALESVRNQVIVVGED HHCCCCCEEHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC LGTVEPSIRETLARFGILSYRLFYFEKNERGEFRRSDEYPLQALVSSTTHDLPTLAGFWV CCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHEE GADIEARRGANIIDDATRREQFEHREREKQKMLDVLFQLHLLPESLPRVAGAYLELTGEL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNAIVGFLAMTPSQLLAINQEDLTKEPHQQNLPGSTWQYPNWGRKMRFTIEQLCGDPETR HHHHHHHHHCCCHHHEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC GYTVMFRDWIERSGRKNQRY CEEEEEHHHHHHCCCCCCCC >Mature Secondary Structure PTDTFEQLLDRAASWYGIDDGFWDIFGNHHTTSVAAKQSILRALGVAVDSAEDLQRSLA CCHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SLARHEWERLLPPAVVATAGAPVELVVNVAAESLGERARFTIARETGEISEYELNLWDLP HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCEEEEEEECCC HVGSAGLNGSTWVQKQAVLPLELPLGYHEITLKVGASSARTRYIVTPDRAWTDPNLGRGG CCCCCCCCCCHHHHHHCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCC RAAGIAVSLYGVRSERNWGCGDFRDLGEVIDWVAQELGASFVALNPLHAIHNRRPFNTSP CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCC YLPNSIFYQNYLYLDIEGMEDFANCRRAVALRASNDISNEIEVLRATPFVEYERVSALKM CCCCCEEECCEEEEEECCCHHHHHHHHHHHEECCCCCCHHHHHHCCCCCHHHHHHHHHHH RFLKLAFVQFLREWRTGSPRARAFDSFREREGDLLEKFATYCALDEHLHRRNPDLWVWTD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC WPAHYQDPCSAETVEFRRRHWRSVVFYEYLQWQLDLQLGRAQQHARNRRLSIGLYHDLAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH ATDRFGSDLWAHRPFYVAGCRVGSPPDDFSPKGQDWAFPPPNAAAHREDGYRLFAESIRK HHHHHCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NCRHGGALRIDHVMRLFRLFWIPDGVDAAQGAYVRERSQDFVRILALESVRNQVIVVGED HHCCCCCEEHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC LGTVEPSIRETLARFGILSYRLFYFEKNERGEFRRSDEYPLQALVSSTTHDLPTLAGFWV CCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHEE GADIEARRGANIIDDATRREQFEHREREKQKMLDVLFQLHLLPESLPRVAGAYLELTGEL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNAIVGFLAMTPSQLLAINQEDLTKEPHQQNLPGSTWQYPNWGRKMRFTIEQLCGDPETR HHHHHHHHHCCCHHHEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC GYTVMFRDWIERSGRKNQRY CEEEEEHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2845225; 9278503 [H]