Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116624377
Identifier: 116624377
GI number: 116624377
Start: 6637348
End: 6638181
Strand: Reverse
Name: 116624377
Synonym: Acid_5298
Alternate gene names: NA
Gene position: 6638181-6637348 (Counterclockwise)
Preceding gene: 116624378
Following gene: 116624376
Centisome position: 66.61
GC content: 65.11
Gene sequence:
>834_bases ATGACCCCCGCTCGCAATCGCACCCTCTGGACTGTCCAGGTTTTGCTCGCCCTGCTCTTTATCTTCTCGGGAGCGATGAA GCTCATCACGCCGGTCGCGGAGATGACGAAAGACGTCGCCCTTCCCGGAGCCTTTCTCCACTTTCTTGGCGTCGCCGAAA TTCTCGGAGGGCTCGGGCTGGTGCTTCCCGGCATGCTCCGCATCCGCCTCGCGCTCACGCCTCTCGCCGCCGCCCTGCTC GCCTTCATCGTGGCCGCCGCCACCGTGATCACGCTCGCCGCAGGCCAGGGCGCCGTTGCGATGCTGCCTTTTGTGACCTT CCTGCTCACATCCTTCGTGGCCTGGGGCCGCTCGCGCCCCGGAGTATTCCGCGTGGAGCGCTCCCTCGCCATCCAGGCGC CGCCGGAACGGATCTTTGCGCACCTCGCCGATTTCCACCACTGGTCCGCCTGGTCCCCCTGGGAGCCCCGCGATCCCGCC ATGAAGAAGACATACAGCGGATCGCCCTCCGGCGAGGGCGCCGTCTACGAGTGGACCGGCAACGCCCAGGTCGGCATGGG CCGCATGGAGATCCTCGAGGCCGCGGCGCCCTCGCGCCTCCGCATCAAGCTCGATTTCCTCAAGCCCTTCGAAGGCCATC AGACCGCCGAGTTCACGCTCGCGCCCTCCGCCGGCGCCACCACCGTAACCTGGGCCGCCTTCGGACCCACCACCTATCTC ACGCTTGTGATGTCGATCTTCTGCAGCATGGATGACCTGCTCGGCAAAGATTTCGTAAGCGGCCTGCAAAACCTCAAGCA CGTCTCGGAACAAAAAGTAGCCACCTCAGTCTAA
Upstream 100 bases:
>100_bases AGGCCATCTCCATCGCCGCCCGCATACCCGGCGCCCGCTATGGGACGATCGAAGTGCGCCCGATCATGGAGATCCCCGGA CTCCCGGAGGAGGCGCGCTC
Downstream 100 bases:
>100_bases GCAAAGGAGCCAAGTATGAAACTCAACGTCTACCTCGTTTTCGACGGCCGCTGCAAAGAGGCCTTCGAGTTCTACCAGAA GGTCCTCGGCGGCAATATCG
Product: DoxX family protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Transcriptional Regulator; DoxX Family Domain-Containing Protein; Transcriptional Activator; Signal Peptide; DoxX Family Protein; Polyketide Cyclase / Dehydrase And Lipid Transport
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTPARNRTLWTVQVLLALLFIFSGAMKLITPVAEMTKDVALPGAFLHFLGVAEILGGLGLVLPGMLRIRLALTPLAAALL AFIVAAATVITLAAGQGAVAMLPFVTFLLTSFVAWGRSRPGVFRVERSLAIQAPPERIFAHLADFHHWSAWSPWEPRDPA MKKTYSGSPSGEGAVYEWTGNAQVGMGRMEILEAAAPSRLRIKLDFLKPFEGHQTAEFTLAPSAGATTVTWAAFGPTTYL TLVMSIFCSMDDLLGKDFVSGLQNLKHVSEQKVATSV
Sequences:
>Translated_277_residues MTPARNRTLWTVQVLLALLFIFSGAMKLITPVAEMTKDVALPGAFLHFLGVAEILGGLGLVLPGMLRIRLALTPLAAALL AFIVAAATVITLAAGQGAVAMLPFVTFLLTSFVAWGRSRPGVFRVERSLAIQAPPERIFAHLADFHHWSAWSPWEPRDPA MKKTYSGSPSGEGAVYEWTGNAQVGMGRMEILEAAAPSRLRIKLDFLKPFEGHQTAEFTLAPSAGATTVTWAAFGPTTYL TLVMSIFCSMDDLLGKDFVSGLQNLKHVSEQKVATSV >Mature_276_residues TPARNRTLWTVQVLLALLFIFSGAMKLITPVAEMTKDVALPGAFLHFLGVAEILGGLGLVLPGMLRIRLALTPLAAALLA FIVAAATVITLAAGQGAVAMLPFVTFLLTSFVAWGRSRPGVFRVERSLAIQAPPERIFAHLADFHHWSAWSPWEPRDPAM KKTYSGSPSGEGAVYEWTGNAQVGMGRMEILEAAAPSRLRIKLDFLKPFEGHQTAEFTLAPSAGATTVTWAAFGPTTYLT LVMSIFCSMDDLLGKDFVSGLQNLKHVSEQKVATSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29853; Mature: 29722
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPARNRTLWTVQVLLALLFIFSGAMKLITPVAEMTKDVALPGAFLHFLGVAEILGGLGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLPGMLRIRLALTPLAAALLAFIVAAATVITLAAGQGAVAMLPFVTFLLTSFVAWGRSRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC GVFRVERSLAIQAPPERIFAHLADFHHWSAWSPWEPRDPAMKKTYSGSPSGEGAVYEWTG CEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECC NAQVGMGRMEILEAAAPSRLRIKLDFLKPFEGHQTAEFTLAPSAGATTVTWAAFGPTTYL CCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCHHHHH TLVMSIFCSMDDLLGKDFVSGLQNLKHVSEQKVATSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPARNRTLWTVQVLLALLFIFSGAMKLITPVAEMTKDVALPGAFLHFLGVAEILGGLGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLPGMLRIRLALTPLAAALLAFIVAAATVITLAAGQGAVAMLPFVTFLLTSFVAWGRSRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC GVFRVERSLAIQAPPERIFAHLADFHHWSAWSPWEPRDPAMKKTYSGSPSGEGAVYEWTG CEEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECC NAQVGMGRMEILEAAAPSRLRIKLDFLKPFEGHQTAEFTLAPSAGATTVTWAAFGPTTYL CCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCHHHHH TLVMSIFCSMDDLLGKDFVSGLQNLKHVSEQKVATSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA