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The map label for this gene is yrhL [H]

Identifier: 116624308

GI number: 116624308

Start: 6557306

End: 6558574

Strand: Reverse

Name: yrhL [H]

Synonym: Acid_5226

Alternate gene names: 116624308

Gene position: 6558574-6557306 (Counterclockwise)

Preceding gene: 116624309

Following gene: 116624304

Centisome position: 65.81

GC content: 59.57

Gene sequence:

>1269_bases
ATGTTGACCCTCTCGCCAATACAACGGCCGATCCTGAGGACCGTGTTTCGAGCGATGTCGCACAGTACTGCTCCGGAACT
AGATAAACTCTCGTGTATGACAAAAGCGATCATCCCGGCTCTGGACGGAGTGCGAGGAATCGCAGTTCTCATGGTCCTCG
CCGTTCATCTGGCAGTAATTGGAGTCGTGCCGGCTCAGTTCCGCATCCTGAATTACGCCCTTTGGACGGGGTGGAGCGGG
GTAGACCTGTTCTTCGCCTTATCCGGGTTCCTCATTACCGGGCAACTGCTCGACACTCTCGGGGCGCCAGGCTACTTCAA
AAACTTCTATATGCGGCGCGCGTTGAGAATTTTCCCCTTGTTCTATCTCGCGCTGGGATTTACCGCTGTGCTCTATCCCT
TCTTGCCGGCCGAAATTCAGGGACATTACCCCACGCGTACCGGGTGGGTTTCTCATATGGTCTACCTGCAAAACTGGTGG
ATGCCGTGGAAAGAGAAGACACACGACGTAATGGGGCACTTCTGGAGCCTCGGGGTGGAGGAGCAGTTCTATTTAATCTG
GCCGGCATGCGTCTTGTGGTTAGGGCGGAAACGGCTCCCATACGCATGCGTGGCCGGGGTCGCCATCGCGCTAGGTCTTC
GGACCTGGGCCGTGCTCGCCGGGCACGAGGACTCAGGGGTAGTTCTCATGGGGACATGGGCGCGCTTCGACACCTTGCTG
GTCGGCGCGCTTTGTGCGGTAATCGTGCGCGGGCGAGTAAGCGTTCAGCGCTACCTCCCGTGGATCGCCGCGGTGTGCTT
GGCGATTACCGCCATTATCGAAATCGGGGCGCGCGAGTACAAGCACCGCGGGACCTACATGCAATCCTTCGGCTATACAG
TACTCGCGGTCGGCTACGGGTGCGTCGTTCTATGGGCGTTCTACTTCAGCAACCGGCGGAACTGGTGGGACCGGGTGCTC
TCCTGGAGTCCACTTCGCGCCGCCGGCAAATACAGCTACGGTATCTACATTTGGCACCTCTGGGTGTATGTGGCCGGAAG
AGCTCTGTGCGGCAAGGCCGAATGGTATGGCCGGAGTCGGATCTGGTCGAGTCTTCTCGCTCTTGCACTGCCGGCGGTCT
CGATCGGCGTGGCGCTGGCGAGCTATCACGGTTTCGAGAAGTGGTTCCTTCGGCTCAAACGCCGGTATGAGCCAGGGAGT
GCTCCAAGCCGACAGGAAGCGACCGCAGGCCGTGTTCTGGCAAGGGCGGCGCAGGCGGATTCCCCCTAA

Upstream 100 bases:

>100_bases
CTGTCGGACGGACCCCCGGCTTCTAGAAAGGTCCGTCCCGCTGCGGCGGCTGCGAGTGCACTTCGCATCAGGACATGCCG
CGAGGGGTTCCTGCAACGAG

Downstream 100 bases:

>100_bases
GTCAAGCTAGGCACTGTCGCAAAGATCAGGCGCATCGCAAGTACCAGACGCATAAGTTCACATTCTTGAGGGCTGGGGAA
TCCTCACACCATCACCGCAT

Product: acyltransferase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLTLSPIQRPILRTVFRAMSHSTAPELDKLSCMTKAIIPALDGVRGIAVLMVLAVHLAVIGVVPAQFRILNYALWTGWSG
VDLFFALSGFLITGQLLDTLGAPGYFKNFYMRRALRIFPLFYLALGFTAVLYPFLPAEIQGHYPTRTGWVSHMVYLQNWW
MPWKEKTHDVMGHFWSLGVEEQFYLIWPACVLWLGRKRLPYACVAGVAIALGLRTWAVLAGHEDSGVVLMGTWARFDTLL
VGALCAVIVRGRVSVQRYLPWIAAVCLAITAIIEIGAREYKHRGTYMQSFGYTVLAVGYGCVVLWAFYFSNRRNWWDRVL
SWSPLRAAGKYSYGIYIWHLWVYVAGRALCGKAEWYGRSRIWSSLLALALPAVSIGVALASYHGFEKWFLRLKRRYEPGS
APSRQEATAGRVLARAAQADSP

Sequences:

>Translated_422_residues
MLTLSPIQRPILRTVFRAMSHSTAPELDKLSCMTKAIIPALDGVRGIAVLMVLAVHLAVIGVVPAQFRILNYALWTGWSG
VDLFFALSGFLITGQLLDTLGAPGYFKNFYMRRALRIFPLFYLALGFTAVLYPFLPAEIQGHYPTRTGWVSHMVYLQNWW
MPWKEKTHDVMGHFWSLGVEEQFYLIWPACVLWLGRKRLPYACVAGVAIALGLRTWAVLAGHEDSGVVLMGTWARFDTLL
VGALCAVIVRGRVSVQRYLPWIAAVCLAITAIIEIGAREYKHRGTYMQSFGYTVLAVGYGCVVLWAFYFSNRRNWWDRVL
SWSPLRAAGKYSYGIYIWHLWVYVAGRALCGKAEWYGRSRIWSSLLALALPAVSIGVALASYHGFEKWFLRLKRRYEPGS
APSRQEATAGRVLARAAQADSP
>Mature_422_residues
MLTLSPIQRPILRTVFRAMSHSTAPELDKLSCMTKAIIPALDGVRGIAVLMVLAVHLAVIGVVPAQFRILNYALWTGWSG
VDLFFALSGFLITGQLLDTLGAPGYFKNFYMRRALRIFPLFYLALGFTAVLYPFLPAEIQGHYPTRTGWVSHMVYLQNWW
MPWKEKTHDVMGHFWSLGVEEQFYLIWPACVLWLGRKRLPYACVAGVAIALGLRTWAVLAGHEDSGVVLMGTWARFDTLL
VGALCAVIVRGRVSVQRYLPWIAAVCLAITAIIEIGAREYKHRGTYMQSFGYTVLAVGYGCVVLWAFYFSNRRNWWDRVL
SWSPLRAAGKYSYGIYIWHLWVYVAGRALCGKAEWYGRSRIWSSLLALALPAVSIGVALASYHGFEKWFLRLKRRYEPGS
APSRQEATAGRVLARAAQADSP

Specific function: Unknown

COG id: COG1835

COG function: function code I; Predicted acyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17559158, Length=364, Percent_Identity=26.3736263736264, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17507287, Length=377, Percent_Identity=26.2599469496021, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193203179, Length=380, Percent_Identity=26.8421052631579, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17507283, Length=381, Percent_Identity=26.7716535433071, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203181, Length=379, Percent_Identity=26.9129287598945, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17509001, Length=384, Percent_Identity=24.7395833333333, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17507733, Length=398, Percent_Identity=26.3819095477387, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71984481, Length=178, Percent_Identity=31.4606741573034, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI212640769, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506687, Length=377, Percent_Identity=25.7294429708223, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656
- InterPro:   IPR013830
- InterPro:   IPR013831 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 47556; Mature: 47556

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]